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Job DescriptionP39298
Confidence99.87%DateThu Jan 5 11:59:04 GMT 2012
Rank93Aligned Residues220
% Identity16%Templatec2qruA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of an alpha/beta hydrolase superfamily protein from2 enterococcus faecalis
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30..... ....40.........50.........60.........70........
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Query Sequence  EIESRELADIPVLHAYPVGQKDTPLPCVIFYHG. . . . FTSSSLVYSYFAVALAQAGLRVIMPDAPDHGSRFSGDAARRLN
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Template Sequence  NQTLANGATV. . . TIYPTT. . TEPTNYVVYLHGGGXIYGTKSDLPEELKELFTSNGYTVLALDYLLAPNTK. . . . . . . . .
Template Known Secondary structure 
TTS
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S..SSS


STTTS

GGG

TTT



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   6...10..... ....20. ........30.........40.........50.........60.........70.
 
   7980.........90.........100.........110.........120.........130 .........140.........150....
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Query Sequence  QFWQILLQSMQEFTTLRAAIAEENWLLDDRLAVGGASMGAMTALGITARHPT. . . . VRCTASMMGSGYFTSLARSLFPPL
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Template Sequence  . . . . . . IDHILRTLTETFQLLNEEIIQNQSFGLCGRSAGGYLXLQLTKQLQTLNLTPQFLVNFYGYTDLEFIKEPRKLLK
Template Known Secondary structure  ......TTTT

TTT


S
S

S
SGGGGS


S
S
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   72.......80.........90.........100.........110.........120.........130.........140.....
 
   155....160...... ...170.........180.........190.........200...
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Query Sequence  IPETAAQQNEFN. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NIVAPLAEWEATNHLEQLSDRPLLLWHGLDDDVVPAD
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Template Sequence  QAISAKEIAAIDQTKPVWDDPFLSRYLLYHYSIQQALLPHFYGLPENGDWSAYALSDETLKTFPPCFSTASSSDEEVPFR
Template Known Secondary structure  S


SGGGTTS

SS

S

TT
TTTT
T

TTS

GGG


TS

TT
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T
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   146...150.........160.........170.........180.........190.........200.........210.........220.....
 
   204.....210.........220.........230.... .....240........
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Query Sequence  ESLRLQQALSETGRDKLLTCSWQPGVRHRIT. . . . . . . . PEALDAAVTFFRQH
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Template Sequence  YSKKIGRTIPES. . . . . . TFKAVYYLEHDFLKQTKDPSVITLFEQLDSWLKER
Template Known Secondary structure  STT
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S

S
GGGGTTST
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   226...230....... ..240.........250.........260.........270..
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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