Job Description P39298 Confidence 99.29% Date Thu Jan 5 11:59:04 GMT 2012 Rank 215 Aligned Residues 202 % Identity 15% Template c2px6A_ PDB info PDB header:transferase Chain: A: PDB Molecule:thioesterase domain; PDBTitle: crystal structure of the thioesterase domain of human fatty2 acid synthase inhibited by orlistat Resolution 2.30 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	L	H	A	Y	P	V	G	Q	K	D	T	P	L	P	C	V	I	F	Y	H	G	F	T	S	S	S	L	V	Y	S	Y	F	A	V	A	L	A	Q	A	G	L	R	V	I	M	P	D	A	P	D	H	G	S	R	F	S	G	D	A	A	R	R	L	N	Q	F	W	Q	I	L	L	Q	S	M	Q	E	F	T
Query Conservation
Alig confidence																.	.																							.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.																							.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	T	L	M	R	L	N	S	V	Q	S	S	E	R	.	.	P	L	F	L	V	H	P	I	E	G	S	T	T	V	F	H	S	L	A	S	R	L	.	.	.	S	I	P	T	Y	G	L	Q	C	T	R	A	A	P	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	I	H	S	L	A	A
Template Known Secondary structure			S				S						S	S		.	.								T	T			S	G	G	G								.	.	.	S	S									T	T	S		T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.	.																							.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2229	2230	.	.	.	.	.	.	.	.	.	2240	.	.			.	.	.	.	.	.	.	2250	.	.	.	.	.	.	.	.	.	2260	.	.	.	.				.	.	.	.	.	2270	.	.	.	.	.	.	.	.	.	2280																	.	.	.	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.					.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	L	R	A	A	I	A	E	E	N	W	L	L	D	D	R	L	A	V	G	G	A	S	M	G	A	M	T	A	L	G	I	T	A	R	.	.	.	.	H	P	T	V	R	C	T	A	S	M	M	G	S	G	Y	F	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																					.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.																				.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.
Template Sequence		Y	Y	I	D	C	I	R	Q	V	Q	P	E	G	P	.	.	Y	R	V	A	G	Y	S	Y	G	A	C	V	A	F	E	M	C	S	Q	L	Q	A	Q	Q	P	T	H	N	S	L	F	L	F	D	G	S	P	T	Y	A	E	A	E	T	E	A	I	C	F	F	V	Q	Q	F	T	D	M	E	H	N	R	V	L	E
Template Known Secondary structure								T	T	T		S	S			.	.							T																											S		S	S																		S
Template Predicted Secondary structure																.	.
Template SS confidence
		2288	.	2290	.	.	.	.	.	.	.	.	.	2300	.			.	.	.	.	.	.	.	.	2310	.	.	.	.	.	.	.	.	.	2320	.	.	.	.	.	.	.	.	.	2330	.	.	.	.	.	.	.	.	.	2340	.	.	.	.	.	.	.	.	.	2350	.	.	.	.	.	.	.	.	.	2360	.	.	.	.	.
																146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	R	S	L	F	P	P	L	I	P	E	T	A	A	Q	Q	N	E	F	N	N	I	V	A	P	L	A	E	W	E	A	T	N	H	L	E	Q	L	S	D	R	P	L	L	L	W	H	G	L	D	D	D	V	V	P	A	D	E	S	L	R	L	Q	Q	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																										.	.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.	.
Template Sequence		A	L	L	P	L	K	G	L	E	E	R	V	A	A	A	V	D	L	I	I	K	S	H	Q	G	L	D	R	Q	E	L	S	F	A	A	R	S	F	Y	Y	K	L	R	A	A	E	Q	Y	T	P	K	A	K	Y	H	G	N	V	M	L	L	R	A	K	T	G	A	D	Y	N	L	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				T	T	S		S																	T	T	S																					T					S		B		S											T	T	T	T	T	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		2386	.	.	.	2390	.	.	.	.	.	.	.	.	.	2400	.	.	.	.	.	.	.	.	.	2410	.	.	.	.	.	.	.	.	.	2420	.	.	.	.	.	.	.	.	.	2430	.	.	.	.	.	.	.	.	.	2440	.	.	.	.	.	.	.	.	.	2450	.	.	.	.	.	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.			.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.
Query SS confidence																							.	.
Query Sequence		L	S	E	T	G	R	D	K	L	L	T	C	S	W	Q	P	G	V	R	H	R	.	.	I	T	P	E	A	L	D	A	A	V	T	F	F	R	Q	H	L
Query Conservation																							.	.
Alig confidence		.	.																.				.	.
Template Conservation		.	.																.
Template Sequence		.	.	S	Q	V	C	D	G	K	V	S	V	H	V	I	E	G	.	D	H	R	T	L	L	E	G	S	G	L	E	S	I	I	S	I	I	H	S	S	L
Template Known Secondary structure		.	.	T	T	T	B		S								S	S	.		T	T	G	G	G	S
Template Predicted Secondary structure		.	.																.
Template SS confidence
				2465	.	.	.	.	2470	.	.	.	.	.	.	.	.	.		2480	.	.	.	.	.	.	.	.	.	2490	.	.	.	.	.	.	.	.	.	2500	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions