Job Description P39298 Confidence 100.00% Date Thu Jan 5 11:59:04 GMT 2012 Rank 2 Aligned Residues 235 % Identity 21% Template c2ecfA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dipeptidyl peptidase iv; PDBTitle: crystal structure of dipeptidyl aminopeptidase iv from2 stenotrophomonas maltophilia Resolution 2.80 Å

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		2	.	.	.	.	.	.		.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40									.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure									.														.																				.	.	.	.	.	.	.	.
Query SS confidence									.														.																				.	.	.	.	.	.	.	.
Query Sequence		I	E	I	E	S	R	E	.	L	A	D	I	P	V	L	H	A	Y	P	V	G	.	Q	K	D	T	P	L	P	C	V	I	F	Y	H	G	F	T	S	S	S	.	.	.	.	.	.	.	.	L	V	Y	S	Y	F	A	V	A	L	A	Q	A	G	L	R	V	I	M	P	D	A	P	D	H	G	S	R	F	S	G
Query Conservation									.														.																				.	.	.	.	.	.	.	.
Alig confidence									.														.																				.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	T	L	T	A	A	D	G	K	T	P	L	N	Y	S	V	I	K	P	A	G	F	D	P	A	K	R	Y	P	V	A	V	Y	V	Y	G	G	P	A	S	Q	T	V	T	D	S	W	P	G	R	G	D	H	L	F	N	Q	Y	L	A	Q	Q	G	Y	V	V	F	S	L	D	N	R	G	T	P	R	R	G	R	D
Template Known Secondary structure							T	T	S	S											S	S			T	T	S											S	T	T			S		S	S					S												T	T									T	T		S	S	S
Template Predicted Secondary structure
Template SS confidence
		490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		D	A	A	R	R	L	N	Q	F	W	Q	I	L	L	Q	S	M	Q	E	F	T	T	L	R	A	A	I	A	E	E	N	W	L	L	D	D	R	L	A	V	G	G	A	S	M	G	A	M	T	A	L	G	I	T	A	R	.	H	P	T	V	R	C	T	A	S	M	M	G	S	G	Y	F	T	S	L	A	R	S	L
Query Conservation																																																										.
Alig confidence												.	.	.																																												.
Template Conservation												.	.	.
Template Sequence		F	G	G	A	L	Y	G	K	Q	G	.	.	.	T	V	E	V	A	D	Q	L	R	G	V	A	W	L	K	Q	Q	P	W	V	D	P	A	R	I	G	V	Q	G	W	S	N	G	G	Y	M	T	L	M	L	L	A	K	A	S	D	S	Y	A	C	G	V	A	G	A	P	V	T	D	W	G	L	Y	D	S	H	Y
Template Known Secondary structure					T	T	T	T		T	T	.	.	.	T															T	S	T	T												T														T	T	T		S						S					G	G	G	S	B
Template Predicted Secondary structure												.	.	.
Template SS confidence
		570	.	.	.	.	.	.	.	.	.				580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		F	P	P	L	I	P	E	T	A	A	Q	Q	N	E	F	N	N	I	V	A	P	L	A	E	W	E	A	T	N	H	L	E	Q	L	S	D	R	P	L	L	L	W	H	G	L	D	D	D	V	V	P	A	D	E	S	L	R	L	Q	Q	A	L	S	E	T	G	R	D	K	L	L	T	C	S	W	Q	P	G	V	R
Query Conservation
Alig confidence							.	.	.	.	.	.	.																								.																																	.	.
Template Conservation							.	.	.	.	.	.	.																								.																																	.	.
Template Sequence		T	E	R	Y	M	.	.	.	.	.	.	.	D	L	P	A	R	N	D	A	G	Y	R	E	A	R	V	L	T	H	I	E	G	L	R	.	S	P	L	L	L	I	H	G	M	A	D	D	N	V	L	F	T	N	S	T	S	L	M	S	A	L	Q	K	R	G	Q	P	.	.	F	E	L	M	T	Y	P	G	A	K
Template Known Secondary structure							.	.	.	.	.	.	.			T	G	G	G									S	G	G	G	G	G	G			.	S								T	T		S	S	S		T													T	T			.	.							T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.																								.																																	.	.
Template SS confidence
		647	.	.	650	.								.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.		.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.			.	.	.	710	.	.	.	.	.	.
		231	.	.	.					.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.
Query SS confidence						.	.	.	.
Query Sequence		H	R	I	T	.	.	.	.	P	E	A	L	D	A	A	V	T	F	F	R	Q	H	L
Query Conservation						.	.	.	.
Alig confidence						.	.	.	.
Template Conservation
Template Sequence		H	G	L	S	G	A	D	A	L	H	R	Y	R	V	A	E	A	F	L	G	R	C	L
Template Known Secondary structure		S	S
Template Predicted Secondary structure
Template SS confidence
		717	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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