Return to main results Retrieve Phyre Job Id

Job DescriptionP16679
Confidence99.88%DateThu Jan 5 11:35:24 GMT 2012
Rank60Aligned Residues200
% Identity17%Templated1w1wa_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases ABC transporter ATPase domain-like
Resolution2.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24... ..30.........40.........50.........60.........
Predicted Secondary structure 

.......






















...........................
Query SS confidence 



. . . . . . .









































. . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  LNRA. . . . . . . SLTVNAGECVVLHGHSGSGKSTLLRSLYANYLPDEGQIQIKH. . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation 
  
.......
  
  

   
 
 









 
 
      
 
    ...........................
Alig confidence 



.......









































...........................
Template Conservation 
 



      
 
    
  


 








 

   
      
        
                      
Template Sequence  LSNFKSYRGVTKVGFGESNFTSIIGPNGSGKSNMMDAISFVLGVLKDLIYRGPQSAYVKAFYQKGNKLVELMRIISRNGD
Template Known Secondary structure  S
SS

S
TT
S
STTSSTT

GGGS




TTTTS
Template Predicted Secondary structure 










































Template SS confidence 















































































   910.........20.........30.........40.........50.........60.........70.........80........
 
   70.........80.........90.........100.........110.........120..... ....130.......
Predicted Secondary structure 





































............











Query SS confidence 























































. . . . . . . . . . . .











Query Sequence  GDEWVDLVTAPARKVVEIRKTTVGWVSQFLRVIPRISALEVVMQPLLDTGVPREAC. . . . . . . . . . . . AAKAARLLTRLN
Query Conservation                        
    
        

 
                ............       
    
Alig confidence 























































............











Template Conservation                                                                                  
Template Sequence  TSYKIDGKTVSYKDYSIFLENENILIKAKNFLVFQGDVEQIAAQSPVELSRMFTFDYVSDHLDAIYRELTGNASLTKYHA
Template Known Secondary structure  TT
TT

TTT
TT
TT
TTS
T

T



Template Predicted Secondary structure 




























Template SS confidence 















































































   117..120.........130.........140.........150.........160.........170.........180.........190......
 
   138.140.........150.........160.... .....170.........180.........190.........200.........210...
Predicted Secondary structure 










....














Query SS confidence 


























. . . .
















































Query Sequence  VPERLWHLAPSTFSGGEQQRVNIARGF. . . . IVDYPILLLDEPTASLDAKNSAAVVELIREAKTRGAAIVGIFHDEAVRN
Query Conservation 
           

 

 

  

 

....   
 







 


      
   
      
 


 


      
Alig confidence 


























....
















































Template Conservation              

 

 
   

  
         
 




   

      
   
        
 
 


      
Template Sequence  TPPLKRFKDMEYLSGGEKTVAALALLFAINSYQPSPFFVLDEVDAALDITNVQRIAAYIRRHRNPDLQFIVISLKNTMFE
Template Known Secondary structure 
TT




GGGS
TSS

SSSTTTT


BTTB
S
T
Template Predicted Secondary structure 

























Template SS confidence 















































































   1117..1120.........1130.........1140.........1150.........1160.........1170.........1180.........1190......
 
   214.....220....
Predicted Secondary structure 




Query SS confidence 










Query Sequence  DVADRLHPMGA
Query Conservation     


 

  
Alig confidence 
.








Template Conservation   . 
       
Template Sequence  K. SDALVGVYR
Template Known Secondary structure  T.
S
Template Predicted Secondary structure  .

Template SS confidence 










   1197 ..1200......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions