Return to main results Retrieve Phyre Job Id

Job DescriptionP16679
Confidence96.49%DateThu Jan 5 11:35:24 GMT 2012
Rank138Aligned Residues122
% Identity12%Templated1u94a1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain)
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40.........50.........60.........70.........80.........90.........100.........110
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Query Sequence  VNAGECVVLHGHSGSGKSTLLRSLYANYLPDEGQIQIKHGDEWVDLVTAPARKVVEIRKTTVGWVSQFLRVIPRISALEV
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Template Sequence  LPMGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHA. . . LDPIYARKLGVDIDNLLCSQPD. . . . . . . . . . . .
Template Known Secondary structure  TTS
STTSSTT

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TT

GGG


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   56...60.........70.........80.........90........ .100.........110.........120
 
   111........120.........130.........140.........150.........160.........170.........180.....
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Query Sequence  VMQPLLDTGVPREACAAKAARLLTRLNVPERLWHLAPSTFSGGEQQRVNIARGFIVDYPILLLDEPTASLDAKNS. . . . .
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEGL
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S
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   121........130.........140.........150.........160
 
   186...190........ .200.......
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Query Sequence  . . . . . AAVVELIREAKTR. GAAIVGIFH
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Template Sequence  AARMMSQAMRKLAGNLKQSNTLLIFINQ
Template Known Secondary structure  T

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   167..170.........180.........190....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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