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Job DescriptionP16679
Confidence96.99%DateThu Jan 5 11:35:24 GMT 2012
Rank111Aligned Residues157
% Identity15%Templated1szpa2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain)
Resolution3.25

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40.........50.........60.........70.........80.........90.........100.........110
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Query Sequence  VNAGECVVLHGHSGSGKSTLLRSLYANYLPDEGQIQIKHGDEWVDLVTAPARKVVEIRKTTVGWVSQFLRVIPRISALEV
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Template Sequence  VETGSITELFGEFRTGKSQLCHTLA. . . . . . . . . . . . . . . . . . . . . VTCQIPLDIGGGEGKCLYIDTEGTFRPVRLVSIA
Template Known Secondary structure  SSSSTTSST.....................TTTTS
TTTT

S
SSS


GGGG
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   175....180.........190......... 200.........210.........220.........230...
 
   111........120.........130.........140.........150.........160.........170......... 180......
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Query Sequence  VMQPLLDTGVPREACAAKAARLLTRLNVPERLWHLAPSTFSGGEQQRVNIARGFIVDYPILLLDEPTAS. . . . LDAKNSA
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Template Sequence  QRFG. . . . . . . . . . . . . . . . . LDPDDALNNVAYARAYNADHQLRLLDAAAQMMSESRFSLIVVDSVMALYRTDELSARQM
Template Known Secondary structure  T
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GGG

STTTTS
TGGGGGS


T
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   234... ..240.........250.........260.........270.........280.........290......
 
   187..190..... ....200.........210 .........220.....
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Query Sequence  AVVELIREA. . . . KTRGAAIVGIFHDEA. . . VRNDVADRLHPMGAS
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Template Sequence  HLAKFMRALQRLADQFGVAVVVTNQVVTGGNIMAHSSTTRLGFKKG
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S
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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