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Job DescriptionP16679
Confidence97.06%DateThu Jan 5 11:35:24 GMT 2012
Rank109Aligned Residues110
% Identity19%Templatec3lxwA_
PDB info PDB header:immune systemChain: A: PDB Molecule:gtpase imap family member 1; PDBTitle: crystal structure of human gtpase imap family member 1
Resolution2.21 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   36...40.........50....... ..60.........70.........80.........90.........100.........110.
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Query Sequence  CVVLHGHSGSGKSTLLRSLYAN. . . . YLPDEGQIQIKHGDEWVDLVTAPARKVVEIRKTTVGWVSQFLRVIPRISALEVV
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Template Sequence  RLILVGRTGAGKSATGNSILGQRRFTRACTTGSRRWDK. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   2930.........40.........50.........60......
 
   112.......120.........130.........140.........150.........160.........170.........180.........190.
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Query Sequence  MQPLLDTGVPREACAAKAARLLTRLNVPERLWHLAPSTFSGGEQQRVNIARGFIVDYPILLLDEPTASLDAKNSAAVVEL
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Template Sequence  . . . . . . . . . . . . . . . . . . . CHVEVVDTPD. IFSSQVSKTDPGCEERGHCYLLSAPGPHALLLVTQLGRFTAQDQQAVRQV
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   76...80..... ....90.........100.........110.........120.........130.....
 
   192...... .200.......
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Query Sequence  IREAKTR. . GAAIVGIFH
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Template Sequence  RDMFGEDVLKWMVIVFTR
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   136...140.........150...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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