Job Description P16679 Confidence 100.00% Date Thu Jan 5 11:35:24 GMT 2012 Rank 43 Aligned Residues 203 % Identity 26% Template c3b5wE_ PDB info PDB header:membrane protein Chain: E: PDB Molecule:lipid a export atp-binding/permease protein msba; PDBTitle: crystal structure of eschericia coli msba Resolution 5.30 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	V	Q	N	V	S	K	T	F	I	L	H	Q	Q	N	G	V	R	L	P	V	L	N	R	A	S	L	T	V	N	A	G	E	C	V	V	L	H	G	H	S	G	S	G	K	S	T	L	L	R	S	L	Y	A	N	Y	L	P	D	E	G	Q	I	Q	I	K	H	G	D	E	W	V	D	L	V	T	A	P	A
Query Conservation
Alig confidence																	.	.	.	.	.																																																					.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.																																																					.	.	.	.	.	.	.	.
Template Sequence		V	E	F	R	N	V	T	F	T	Y	P	G	R	D	V	.	.	.	.	.	P	A	L	R	N	I	N	L	K	I	P	A	G	K	T	V	A	L	V	G	R	S	G	S	G	K	S	T	I	A	S	L	I	T	R	F	Y	D	I	D	E	G	E	I	L	M	D	G	H	D	L	R	.	.	.	.	.	.	.	.
Template Known Secondary structure					S	S		B		B		S	S	S	S		.	.	.	.	.	B	S	S		S							T	T							S	S	T	T	S	S								T	T	T		S			B	S	S					S	S	S	B	T	T	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.	.	.	.	.																																																					.	.	.	.	.	.	.	.
Template SS confidence
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.						.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.											.	.	.	150	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.	.	.
Query Sequence		R	K	V	V	E	I	R	K	T	T	V	G	W	V	S	Q	F	L	R	V	I	P	R	I	S	A	L	E	V	V	M	Q	P	L	L	D	T	G	V	P	R	E	A	C	A	A	K	A	A	R	L	L	T	R	L	N	V	P	E	R	L	W	H	L	A	.	.	.	.	.	.	.	.	.	.	P	S	T	F	S
Query Conservation																																																																			.	.	.	.	.	.	.	.	.	.
Alig confidence																									.											.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.
Template Conservation																									.											.	.	.	.	.
Template Sequence		E	Y	T	L	A	S	L	R	N	Q	V	A	L	V	S	Q	N	V	H	L	F	N	D	.	T	V	A	N	N	I	A	Y	A	R	.	.	.	.	.	T	E	Q	Y	S	R	E	Q	I	E	E	A	A	R	M	A	Y	A	M	D	F	I	N	K	M	D	N	G	L	D	T	V	I	G	E	N	G	V	L	L	S
Template Known Secondary structure		T	S							T	T						S						S	S	.		B	S	T	T	T	T	S	S	S	.	.	.	.	.	S	T	T	S			T	T					T	T	T	T	S	T					T	T	S	S	S	S	S	B					T	T	S		S	S
Template Predicted Secondary structure																									.											.	.	.	.	.
Template SS confidence
		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.		.	.	.	.	.	.	.	.	440	.						.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	E	Q	Q	R	V	N	I	A	R	G	F	I	V	D	Y	P	I	L	L	L	D	E	P	T	A	S	L	D	A	K	N	S	A	A	V	V	E	L	I	R	E	A	K	T	R	G	A	A	I	V	G	I	F	H	D	E	A	V	R	N	D	V	A	D	R	L	H	P	M	G	A	S
Query Conservation
Alig confidence																																																.																	.
Template Conservation																																																.																	.
Template Sequence		G	G	Q	R	Q	R	I	A	I	A	R	A	L	L	R	D	S	P	I	L	I	L	D	E	A	T	S	A	L	D	T	E	S	E	R	A	I	Q	A	A	L	D	E	L	Q	K	.	N	R	T	S	L	V	I	A	H	R	L	S	T	I	E	K	.	A	D	E	I	V	V	V	E	D	G
Template Known Secondary structure										T					T	S			S							T	T	S	S									T	T					T	T	T	S	.	S	S							S	S	G	G	G	T	T	T	.		S	S	B					T	T
Template Predicted Secondary structure																																																.																	.
Template SS confidence
		483	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.		.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.		.	.	.	.	.	550	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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