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Job DescriptionP16679
Confidence100.00%DateThu Jan 5 11:35:24 GMT 2012
Rank26Aligned Residues210
% Identity27%Templatec2yz2B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:putative abc transporter atp-binding protein tm_0222; PDBTitle: crystal structure of the abc transporter in the cobalt transport2 system
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  INVQNVSKTFILHQQNGVRLPVLNRASLTVNAGECVVLHGHSGSGKSTLLRSLYANYLPDEGQIQIKHGDEWVDLVTAPA
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Template Sequence  IEVVNVSHIFHRGTPLE. . KKALENVSLVINEGECLLVAGNTGSGKSTLLQIVAGLIEPTSGDVLYDG. . . . . . . . . . . E
Template Known Secondary structure  TTTSTT
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   3......10......... 20.........30.........40.........50.........60........ .
 
   82.......90........ .100.........110.........120.........130......... 140.........150.........
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Query Sequence  RKVVEIRKTTVGWVSQF. LRVIPRISALEVVMQPLLDTGVPREACAAKAARLLTRLNVP. ERLWHLAPSTFSGGEQQRVN
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Template Sequence  RKKGYEIRRNIGIAFQYPEDQFFAERVFDEVAFAVKNFY. PDRDPVPLVKKAMEFVGLDFDSFKDRVPFFLSGGEKRRVA
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   70.........80.........90.........100........ .110.........120.........130.........140........
 
   160.........170.........180.........190.........200.........210.........220.....
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Query Sequence  IARGFIVDYPILLLDEPTASLDAKNSAAVVELIREAKTRGAAIVGIFHDEAVRNDVADRLHPMGAS
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Template Sequence  IASVIVHEPDILILDEPLVGLDREGKTDLLRIVEKWKTLGKTVILISHDIETVINHVDRVVVLEKG
Template Known Secondary structure  TT

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   149150.........160.........170.........180.........190.........200.........210....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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