Job Description P16679 Confidence 100.00% Date Thu Jan 5 11:35:24 GMT 2012 Rank 31 Aligned Residues 206 % Identity 28% Template c2yl4A_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:atp-binding cassette sub-family b member 10, PDBTitle: structure of the human mitochondrial abc transporter, abcb10 Resolution 2.85 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	V	Q	N	V	S	K	T	F	I	L	H	Q	Q	N	G	V	R	L	P	V	L	N	R	A	S	L	T	V	N	A	G	E	C	V	V	L	H	G	H	S	G	S	G	K	S	T	L	L	R	S	L	Y	A	N	Y	L	P	D	E	G	Q	I	Q	I	K	H	G	D	E	W	V	D	L	V	T	A	P	A
Query Conservation
Alig confidence																	.	.	.	.																																																					.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.																																																					.	.	.	.	.	.	.	.
Template Sequence		L	E	F	K	N	V	H	F	A	Y	P	A	R	P	E	.	.	.	.	V	P	I	F	Q	D	F	S	L	S	I	P	S	G	S	V	T	A	L	V	G	P	S	G	S	G	K	S	T	V	L	S	L	L	L	R	L	Y	D	P	A	S	G	T	I	S	L	D	G	H	D	I	.	.	.	.	.	.	.	.	R
Template Known Secondary structure												S	S		T	T	.	.	.	.	S												T	T									T	T	S	S	S	T							T	T	S	S			S							T	T			T	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																	.	.	.	.																																																					.	.	.	.	.	.	.	.
Template SS confidence
		492	.	.	.	.	.	.	.	500	.	.	.	.	.	.					.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.									.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.											.	.	.	150	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.	.	.
Query Sequence		R	K	V	V	E	I	R	K	T	T	V	G	W	V	S	Q	F	L	R	V	I	P	R	I	S	A	L	E	V	V	M	Q	P	L	L	D	T	G	V	P	R	E	A	C	A	A	K	A	A	R	L	L	T	R	L	N	V	P	E	R	L	W	H	L	A	.	.	.	.	.	.	.	.	.	.	P	S	T	F	S
Query Conservation																																																																			.	.	.	.	.	.	.	.	.	.
Alig confidence																									.										.	.	.																														.	.	.	.	.	.	.	.	.	.
Template Conservation																									.										.	.	.
Template Sequence		Q	L	N	P	V	W	L	R	S	K	I	G	T	V	S	Q	E	P	I	L	F	S	C	.	S	I	A	E	N	I	A	Y	G	.	.	.	A	D	D	P	S	S	V	T	A	E	E	I	Q	R	V	A	E	V	A	N	A	V	A	F	I	R	N	F	P	Q	G	F	N	T	V	V	G	E	K	G	V	L	L	S
Template Known Secondary structure		T	B								S						S	S					S	S	.	B							T	T	.	.	.	S	S	S	T	T	T	S												T	T							T	S	S	S	G	G	G		B		S	S	S	S
Template Predicted Secondary structure																									.										.	.	.
Template SS confidence
		560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.		.	.	.	.	.	.	.	590	.				.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	E	Q	Q	R	V	N	I	A	R	G	F	I	V	D	Y	P	I	L	L	L	D	E	P	T	A	S	L	D	A	K	N	S	A	A	V	V	E	L	I	R	E	A	K	T	R	G	A	A	I	V	G	I	F	H	D	E	A	V	R	N	D	V	A	D	R	L	H	P	M	G	A	S
Query Conservation
Alig confidence																																															.																		.
Template Conservation																																															.																		.
Template Sequence		G	G	Q	K	Q	R	I	A	I	A	R	A	L	L	K	N	P	K	I	L	L	L	D	E	A	T	S	A	L	D	A	E	N	E	Y	L	V	Q	E	A	L	D	R	L	M	.	D	G	R	T	V	L	V	I	A	H	R	L	S	T	I	K	N	.	A	N	M	V	A	V	L	D	Q	G
Template Known Secondary structure																			S									S	S																		.	T	T	S															.	S	S							T	T
Template Predicted Secondary structure																																															.																		.
Template SS confidence
		636	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680		.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.		.	.	700	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions