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Job DescriptionP16679
Confidence100.00%DateThu Jan 5 11:35:24 GMT 2012
Rank12Aligned Residues212
% Identity33%Templatec2pcjB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:lipoprotein-releasing system atp-binding protein lold; PDBTitle: crystal structure of abc transporter (aq_297) from aquifex aeolicus2 vf5
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MINVQNVSKTFILHQQNGVRLPVLNRASLTVNAGECVVLHGHSGSGKSTLLRSLYANYLPDEGQIQIKHGDEWVDLVTAP
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Template Sequence  ILRAENIKKVIRG. . . . . . . YEILKGISLSVKKGEFVSIIGASGSGKSTLLYILGLLDAPTEGKVFLEG. . . . KEVDYTN
Template Known Secondary structure  TT.......TT


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   4.....10...... ...20.........30.........40.........50.........60..... ....70..
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  ARKVVEIRKTTVGWVSQFLRVIPRISALEVVMQPLLDTGVPREACAAKAARLLTRLNVPERLWHLAPSTFSGGEQQRVNI
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Template Sequence  EKELSLLRNRKLGFVFQFHYLIPELTALENVIVPMLKMGKPKKEAKERGEYLLSELGLGD. KLSRKPYELSGGEQQRVAI
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Query Sequence  ARGFIVDYPILLLDEPTASLDAKNSAAVVELIREAKTRGAAIVGIFHDEAVRNDVADRLHPMGAS
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Template Sequence  ARALANEPILLFADEPTGNLDSANTKRVMDIFLKINEGGTSIVMVTHERELA. ELTHRTLEMKDG
Template Known Secondary structure  TT

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   152.......160.........170.........180.........190.........200... ......210.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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