Return to main results Retrieve Phyre Job Id

Job DescriptionP16679
Confidence100.00%DateThu Jan 5 11:35:24 GMT 2012
Rank40Aligned Residues196
% Identity26%Templatec2cbzA_
PDB info PDB header:transportChain: A: PDB Molecule:multidrug resistance-associated protein 1; PDBTitle: structure of the human multidrug resistance protein 12 nucleotide binding domain 1
Resolution1.5 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  INVQNVSKTFILHQQNGVRLPVLNRASLTVNAGECVVLHGHSGSGKSTLLRSLYANYLPDEGQIQIKHGDEWVDLVTAPA
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Template Sequence  ITVRNATFTWARSDP. . . . . PTLNGITFSIPEGALVAVVGQVGCGKSSLLSALLAEMDKVEGHVAIKG. . . . . . . . . . . .
Template Known Secondary structure  S
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   644.....650........ .660.........670.........680.........690.........700......
 
   82.......90.........100.........110.........120.........130.........140.. .......150........
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Query Sequence  RKVVEIRKTTVGWVSQFLRVIPRISALEVVMQPLLDTGVPREACAAKAARLLTRLNVPERL. . . WHLAPSTFSGGEQQRV
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Template Sequence  . . . . . . . . . SVAYVPQQAWIQ. NDSLRENILFGCQLEEPYYRSVIQACALLPDLEILPSGDRTEIGEKGVNLSGGQKQRV
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SS



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   707..710........ .720.........730.........740.........750.........760.........770......
 
   159160.........170.........180.........190....... ..200.........210.........220.....
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Query Sequence  NIARGFIVDYPILLLDEPTASLDAKNSAAVVELIREAKT. . RGAAIVGIFHDEAVRNDVADRLHPMGAS
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Template Sequence  SLARAVYSNADIYLFDDPLSAVDAHVGKHIFENVIGPKGMLKNKTRILVTHSMSYLPQ. VDVIIVMSGG
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SSTTTTS
TTSTTSTTTTS
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   777..780.........790.........800.........810.........820.........830.... .....840....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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