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Job DescriptionP16679
Confidence96.99%DateThu Jan 5 11:35:24 GMT 2012
Rank112Aligned Residues122
% Identity19%Templatec1xp8A_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:reca protein; PDBTitle: "deinococcus radiodurans reca in complex with atp-gamma-s"
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40.........50.........60.........70.........80.........90.........100.........110
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Query Sequence  VNAGECVVLHGHSGSGKSTLLRSLYANYLPDEGQIQIKHGDEWVDLVTAPARKVVEIRKTTVGWVSQFLRVIPRISALEV
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Template Sequence  IPRGRITEIYGPESGGKTTLALAIVAQAQKAGGTCAFID. . . . AEHALDPVYARALGVNTDELLVSQPDNGEQALEIMEL
Template Known Secondary structure  TTSSTTSSTT

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TT

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   68.70.........80.........90.........100...... ...110.........120.........130.........140...
 
   111........120.........130.........140.........150.........160.........170.... .....180..
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Query Sequence  VMQPLLDTGVPREACAAKAARLLTRLNVPERLWHLAPSTFSGGEQQRVNIARGFIVDYPILLLD. . . . . . . . EPTASLDA
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Template Sequence  LVRS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GAIDVVVVDSVAALTPRAEIPGLQA
Template Known Secondary structure  TT...................................................T

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   144... ..150.........160.........170..
 
   183......190........ .200.......
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Query Sequence  KNSAAVVELIREAKTR. GAAIVGIFH
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Template Sequence  RLMSQALRKLTAILSKTGTAAIFINQ
Template Known Secondary structure  TTT

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   181........190.........200......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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