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Job DescriptionP16679
Confidence100.00%DateThu Jan 5 11:35:24 GMT 2012
Rank4Aligned Residues206
% Identity30%Templatec1q1bD_
PDB info PDB header:transport proteinChain: D: PDB Molecule:maltose/maltodextrin transport atp-binding protein malk; PDBTitle: crystal structure of e. coli malk in the nucleotide-free form
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  INVQNVSKTFILHQQNGVRLPVLNRASLTVNAGECVVLHGHSGSGKSTLLRSLYANYLPDEGQIQIKHGDEWVDLVTAPA
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Template Sequence  VQLQNVTKAWGE. . . . . . . VVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLFIGEKRMNDTPPA. . .
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TT.......

TT

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SSTT
TT

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   4.....10..... ....20.........30.........40.........50.........60.........70...
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  RKVVEIRKTTVGWVSQFLRVIPRISALEVVMQPLLDTGVPREACAAKAARLLTRLNVPERLWHLAPSTFSGGEQQRVNIA
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Template Sequence  . . . . . . . ERGVGMVFQSYALYPHLSVAENMSFGLKLAGAKKEVINQRVNQVAEVLQLAH. LLDRKPKALSGGQRQRVAIG
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B
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TTS
TTTTTTSSSSTTTTTTTTTGGGT
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GGGTTTSSSSTT
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   74.....80.........90.........100.........110.........120..... ....130.........140.....
 
   162.......170.........180.........190..... ....200.........210.........220.....
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Query Sequence  RGFIVDYPILLLDEPTASLDAKNSAAVVELIREA. KTRGAAIVGIFHDEAVRNDVADRLHPMGAS
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Template Sequence  RTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAG
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BSSTTTT

TTTTT

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   146...150.........160.........170.........180.........190.........200.........210
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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