Return to main results Retrieve Phyre Job Id

Job DescriptionP64471
Confidence1.49%DateThu Jan 5 12:08:39 GMT 2012
Rank49Aligned Residues15
% Identity33%Templatec3iysA_
PDB info PDB header:virusChain: A: PDB Molecule:major capsid protein vp1; PDBTitle: homology model of avian polyomavirus asymmetric unit
Resolution11.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   42.......50......
Predicted Secondary structure 



Query SS confidence 














Query Sequence  RLLRGWIYAGDIWHP
Query Conservation 




 


 




Alig confidence 














Template Conservation 




  



 
 
Template Sequence  RLDKDGLYPIECWCP
Template Known Secondary structure 


STTTSBTTT
Template Predicted Secondary structure 







Template SS confidence 














   187..190.........200.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions