Return to main results Retrieve Phyre Job Id

Job DescriptionQ06065
Confidence98.65%DateThu Jan 5 12:33:23 GMT 2012
Rank191Aligned Residues221
% Identity16%Templated1sxja2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.85

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   138.140.........150.........160. ........170.........180.........190.........200..
Predicted Secondary structure 
















...............
























Query SS confidence 























. . . . . . . . . . . . . . .








































Query Sequence  TSWQWGHILTNSPAMMDICKDTAK. . . . . . . . . . . . . . . IALSQASVLISGESGTGKELIARAIHYNSRRAKGPFIKVNC
Query Conservation         


 
  
  
   
  ............... 
    



 

 



   
  

  
       
 
 
Alig confidence 























...............



























...









Template Conservation   
    



       
   
                        


 

 
 



 
  

 
...          
Template Sequence  APTNLQQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGKTTAAHLVAQE. . . LGYDILEQNA
Template Known Secondary structure 

SSGGG

S
TTTT



TTSTTS
S
STTSS...TT

T
Template Predicted Secondary structure 





















...




Template SS confidence 















































































   303......310.........320.........330.........340.........350.........360......... 370.........
 
   203......210.........220.........230.........240.........250.........260.........270.........280..
Predicted Secondary structure 














































Query SS confidence 















































































Query Sequence  AALPESLLESELFGHEKGAFTGAQTLRQGLFERANEGTLLLDEIGEMPLVLQAKLLRILQEREFERIGGHQTIKVDIRII
Query Conservation          
  


    
 
       
    
 



 
  
  
    
  
   
                  


Alig confidence 



















.







































..........








Template Conservation                      .                

  
               
   ..........        
Template Sequence  SDVRSKTLLNAGVKNALDNM. SVVGYFKHQNLNGKHFVIIMDEVDGMSGGDRGGVGQLAQF. . . . . . . . . . CRKTSTPLI
Template Known Secondary structure  TS


TGGGGTT

.
STTTTT


SSTTS
SGGG

TTSTT..........
SS
Template Predicted Secondary structure 







.












..........




Template SS confidence 















































































   380.........390......... 400.........410.........420.........430......... 440........
 
   283......290.........300.........310.........320.........330.........340.........350.........360..
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  AATNRDLQAMVKEGTFREDLFYRLNVIHLILPPLRDRREDISLLANHFLQKFSSENQRDIIDIDPMAMSLLTAWSWPGNI
Query Conservation    
   
        
   
   
    
 

 



 


  
    
              
  
   
  
 




Alig confidence 





......


























........










...













.



Template Conservation   
    ......              
 
          ........ 
  
   
  ...      
  
   
. 


Template Sequence  LICNER. . . . . . NLPKMRPFDRVCLDIQFRRPDANSIKS. . . . . . . . RLMTIAIREKF. . . KLDPNVIDRLIQTT. RGDI
Template Known Secondary structure  S
T......TSSTTGGGTTTS




........T
...


TTT.TT
Template Predicted Secondary structure 


......






........


...



.


Template SS confidence 















































































   453..... .460.........470.........480..... ....490...... ...500.........510 ....
 
   363......370.........380.........390..
Predicted Secondary structure 






Query SS confidence 





























Query Sequence  RELSNVIERAVVMNSGPIIFSEDLPPQIRQ
Query Conservation   

   
           
    
      
Alig confidence 












..














Template Conservation 
 

  
      ..   
    
      
Template Sequence  RQVINLLSTISTT. . TKTINHENINEISKA
Template Known Secondary structure  T..SS


TT
Template Predicted Secondary structure 
..




Template SS confidence 





























   515....520....... ..530.........540..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions