|   |
138 | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | S | W | Q | W | G | H | I | L | T | N | S | P | A | M | M | D | I | C | K | D | T | A | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
I | A | L | S | Q | A | S | V | L | I | S | G | E | S | G | T | G | K | E | L | I | A | R | A | I | H | Y | N | S | R | R | A | K | G | P | F | I | K | V | N | C |
Query Conservation |   |
  |   |   |   |   |   |   |
|
|
|   |
|   |   |
|   |   |
|   |   |   |
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |   |   |
|
|
|
|   |
|
|   |
|
|
|
|   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |
|   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|   |
|   |
|
|
|
|   |
|   |   |
|
|   |
| . | . | . |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
A | P | T | N | L | Q | Q | V | C | G | N | K | G | S | V | M | K | L | K | N | W | L | A | N | W | E | N | S | K | K | N | S | F | K | H | A | G | K | D | G | S | G | V | F | R | A | A | M | L | Y | G | P | P | G | I | G | K | T | T | A | A | H | L | V | A | Q | E | . |
. |
. |
L | G | Y | D | I | L | E | Q | N | A |
Template Known Secondary structure |   |
|
| S | S | G | G | G |
|
| S |
|  |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  | T | T | T |
|
|
|
| T | T | S | T | T | S |
| S |  |  |  |  |  |
| S | T | T | S | S |  |  |  |  |  |  |  |  |  |  |  | . | . | . | T | T |
|  |  |  |  |  |
| T |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |
|
|
|  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
303 | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | |
|
|
370 | . | . | . | . | . | . | . | . | . |
  |
  |   |
203 | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | A | L | P | E | S | L | L | E | S | E | L | F | G | H | E | K | G | A | F | T | G | A | Q | T | L | R | Q | G | L | F | E | R | A | N | E | G | T | L | L | L | D | E | I | G | E | M | P | L | V | L | Q | A | K | L | L | R | I | L | Q | E | R | E | F | E | R | I | G | G | H | Q | T | I | K | V | D | I | R | I | I |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |
|
|
|   |   |   |   |
|   |
|   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|
|
|
|   |
|   |   |
|   |   |
|   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |
|
Template Sequence |   |
S | D | V | R | S | K | T | L | L | N | A | G | V | K | N | A | L | D | N | M | . |
S | V | V | G | Y | F | K | H | Q | N | L | N | G | K | H | F | V | I | I | M | D | E | V | D | G | M | S | G | G | D | R | G | G | V | G | Q | L | A | Q | F | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
C | R | K | T | S | T | P | L | I |
Template Known Secondary structure |   |
T | S |
|
|
|  |  |  |  |  |  | T | G | G | G | G | T | T |
|
| . |
| S | T | T | T | T | T |
|
|
| S | S | T | T | S |  |  |  |  |  |
| S | G | G | G |
|
| T | T | S | T | T |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |
| S | S |
|  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | |
400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
440 | . | . | . | . | . | . | . | . |
  |
  |   |
283 | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | A | T | N | R | D | L | Q | A | M | V | K | E | G | T | F | R | E | D | L | F | Y | R | L | N | V | I | H | L | I | L | P | P | L | R | D | R | R | E | D | I | S | L | L | A | N | H | F | L | Q | K | F | S | S | E | N | Q | R | D | I | I | D | I | D | P | M | A | M | S | L | L | T | A | W | S | W | P | G | N | I |
Query Conservation |   |
  |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |
|   |
|
|   |
|
|
|
|   |
|
|
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . |   |
|   |   |
|   |   |   |
|   |   | . | . | . |   |   |   |   |   |   |
|   |   |
|   |   |   |
| . |   |
|
|
|
Template Sequence |   |
L | I | C | N | E | R | . |
. |
. |
. |
. |
. |
N | L | P | K | M | R | P | F | D | R | V | C | L | D | I | Q | F | R | R | P | D | A | N | S | I | K | S | . |
. |
. |
. |
. |
. |
. |
. |
R | L | M | T | I | A | I | R | E | K | F | . |
. |
. |
K | L | D | P | N | V | I | D | R | L | I | Q | T | T | . |
R | G | D | I |
Template Known Secondary structure |   |
 |  |  | S |
| T | . | . | . | . | . | . | T | S | S | T | T | G | G | G | T | T | T | S |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  | T |
| . | . | . |
|
|
| T | T |  |  |  |  |  |  |  |  | T | . | T | T |
|  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
| . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
| . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
453 | . | . | . | . | . | |
|
|
|
|
|
. | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | 490 | . | . | . | . | . | . | |
|
|
. | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | |
. | . | . | . |
  |
  |   |
363 | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | E | L | S | N | V | I | E | R | A | V | V | M | N | S | G | P | I | I | F | S | E | D | L | P | P | Q | I | R | Q |
Query Conservation |   |
  |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |   |
|   |   |   |   |   |   | . | . |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |
Template Sequence |   |
R | Q | V | I | N | L | L | S | T | I | S | T | T | . |
. |
T | K | T | I | N | H | E | N | I | N | E | I | S | K | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T |  |  |  |  |  | . | . | S | S |
|
|
| T | T |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
515 | . | . | . | . | 520 | . | . | . | . | . | . | . | |
|
. | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . |
  |