Return to main results Retrieve Phyre Job Id

Job DescriptionQ06065
Confidence99.76%DateThu Jan 5 12:33:23 GMT 2012
Rank88Aligned Residues229
% Identity17%Templated1r6bx3
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.25

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  HILTNSPAMMDICKDTAKIALSQAS. . . . . . . VLISGESGTGKELIARAIHYNSRRAKGPFIKVNCAALPESLLESELFG
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Template Sequence  LVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKA. . . LGIELLRFDMSEYMERHTVSRLIG
Template Known Secondary structure  TS
S
TT
S
TTS
S
STTSS...T
GGG
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Query Sequence  HEKGAFTGAQ. TLRQGLFERANEGTLLLDEIGEMPLVLQAKLLRILQEREFERIGGHQTIKVDIRIIAATNRDLQAMVKE
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Template Sequence  APPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRAMEEI
Template Known Secondary structure 

S
STT
SSTGGGS
STTT
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   296...300.........310.........320.........330.........340.........350..... ....360.........370..
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Query Sequence  . GTFREDLFYRLNVIHLILPPLRDRREDISLLANHFLQKFSSENQRDIIDIDPMAMSLLTA. . WSWPGNIRELSNVIERA
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Template Sequence  KKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLE. VSQEARNWLAEKGYDRAMGARPMARVIQDN
Template Known Secondary structure  S
TT
S




TT.

BTTTBTTT
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   633......640.........650.........660.........670.........680. ........690.........700.........710.
 
   373...
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Query Sequence  VVMN
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Template Conservation 
   
Template Sequence  LKKP
Template Known Secondary structure  T
Template Predicted Secondary structure 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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