Return to main results Retrieve Phyre Job Id

Job DescriptionQ06065
Confidence98.94%DateThu Jan 5 12:33:23 GMT 2012
Rank167Aligned Residues271
% Identity15%Templated1qvra2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution3.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   138.140.........150.........160.........170.........180.........190.........200.........210.......
Predicted Secondary structure 
















































Query SS confidence 















































































Query Sequence  TSWQWGHILTNSPAMMDICKDTAKIALSQASVLISGESGTGKELIARAIHYNSRRAKGPFIKVNCAALPESLLESELFGH
Query Conservation         


 
  
  
   
   
    



 

 



   
  

  
       
 
 
        
  


 
Alig confidence 























..
























..........


















Template Conservation           

   
  
   
  ..      

 

 
 


 

  

 ..........                   
Template Sequence  AEGKLDPVIGRDEEIRRVIQILLR. . RTKNNPVLIGEPGVGKTAIVEGLAQ. . . . . . . . . . RIVKGDVPEGLKGKRIVSL
Template Known Secondary structure  TT
S



S

..SS




TTS
..........T
S
TTSTT
Template Predicted Secondary structure 










..










..........






Template SS confidence 















































































   165....170.........180........ .190.........200.........210... ......220.........230..
 
   218.220.........230.........240.........250.........260.........270.........280.........290.......
Predicted Secondary structure 















































Query SS confidence 















































































Query Sequence  EKGAFTGAQTLRQGLFERANEGTLLLDEIGEMPLVLQAKLLRILQEREFERIGGHQTIKVDIRIIAATNRDLQAMVKEGT
Query Conservation     
 
       
    
 



 
  
  
    
  
   
                  


  
   
        
Alig confidence 

































........................

















...
Template Conservation                        






     ........................      
           ... 
Template Sequence  QMEFEERLKAVIQEVVQSQGEVILFIDELKPALA. . . . . . . . . . . . . . . . . . . . . . . . RGELRLIGATTLDEYREI. . . E
Template Known Secondary structure 


TT
SS


........................TT



...T
Template Predicted Secondary structure 











........................







...
Template SS confidence 















































































   233......240.........250.........260...... ...270.........280.... .
 
   298.300.........310.........320.........330.........340.........350.... ..... 360........
Predicted Secondary structure 

















........




.

Query SS confidence 
























































. . . . . . . .




.








Query Sequence  FREDLFYRLNVIHLILPPLRDRREDISLLANHFLQKFSSENQRDIIDIDPMAMSLLT. . . . . . . . AWSWP. GNIRELSNV
Query Conservation 
   
   
    
 

 



 


  
    
              
  
   
 ........ 
 

.


 

   
Alig confidence 



































.......













........




.








Template Conservation      
      
 
          

          .......        

                   
  
    
Template Sequence  KDPALERRFQPVYVDEPTVEETISILRGLKEKYEVH. . . . . . . HGVRISDSAIIAAATLSHRYITERRLPDKAIDLIDEA
Template Known Secondary structure  T
TTT
S







.......TT



SS
T
Template Predicted Secondary structure 







.......










Template SS confidence 















































































   316...320.........330.........340.........350. ........360.........370.........380........
 
   369370.........380.........390.........400......... 410.....
Predicted Secondary structure 























.................................
Query SS confidence 








































. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .





Query Sequence  IERAVVMNSGPIIFSEDLPPQIRQPVCNAGEVKTAPVGERN. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LKEEIK
Query Conservation 
           
    
                       .................................
   
 
Alig confidence 








































.................................





Template Conservation                                                    
  
   
                      
Template Sequence  AARLRMALESAPEEIDALERKKLQLEIEREALKKEKDPDSQERLKAIEAEIAKLTEEIAKLRAEWEREREILRKLREAQH
Template Known Secondary structure  TTTTSS
SSS
T
Template Predicted Secondary structure 




Template SS confidence 















































































   389390.........400.........410.........420.........430.........440.........450.........460........
 
   416...420.........430.........440.........450....
Predicted Secondary structure 






Query SS confidence 






































Query Sequence  RVEKRIIMEVLEQQEGNRTRTALMLGISRRALMYKLQEY
Query Conservation    
   
  

    

   

  




 

 



  
Alig confidence 






































Template Conservation   
                     
        
  

  
Template Sequence  RLDEVRREIELAERQYDLNRAAELRYGELPKLEAEVEAL
Template Known Secondary structure  TTTT
TT
Template Predicted Secondary structure 








Template SS confidence 






































   469470.........480.........490.........500.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions