Return to main results Retrieve Phyre Job Id

Job DescriptionQ06065
Confidence98.54%DateThu Jan 5 12:33:23 GMT 2012
Rank198Aligned Residues210
% Identity24%Templated1ixza_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  QWGHILTNSPAMMDICKDTAKIA. . . . . . . . . . LSQASVLISGESGTGKELIARAIHYNSRRAKGPFIKVNCAALPESLL
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Template Sequence  TFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGE. . . ARVPFITASGSDFVEMFV
Template Known Secondary structure 
GGG

S

TT



S

TTSS...TT

S
T
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   154.....160.........170.........180.........190.........200.........210.. .......220.........230
 
   211........220.........230.........240.........250.... .....260.........270.........280.....
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Query Sequence  ESELFGHEKGAFTGAQTLRQGLFERANEGTLLLDEIGEMPLVLQ. . . . . AKLLRILQEREFERIGGHQTIKVDIRIIAAT
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Template Sequence  GVGA. . . . . . . . . ARVRDLFETAKRHAPCIVFIDEIDAVGRNDEREQTLNQLLVEMDG. . . . . . . . . FEKDTAIVVMAAT
Template Known Secondary structure  T.........TTSSST

T.........

TT

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   231... .....240.........250.........260.........270......... 280.........290..
 
   286.. .290.........300.........310.........320.........330.........340.........350.........360..
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Query Sequence  NRD. . . LQAMVKEGTFREDLFYRLNVIHLILPPLRDRREDISLLANHFLQKFSSENQRDIIDIDPMAMSLLTAWSWPGNI
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Template Sequence  NRPDILDPALLRPGRFD. . . . . . . RQIAIDAPDVKGREQ. . . . . . . . . . . . ILRIHARGKPLAEDVDLALLAKRTPGFVG
Template Known Secondary structure  S
GGGS
GGGGSTTSS
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S

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B
TT

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TT

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   302.......310........ .320.........330... ......340.........350.........360..
 
   363......370...... ...380.........390
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Query Sequence  RELSNVIERAVVMN. . . SGPIIFSEDLPPQI
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Template Sequence  ADLENLLNEAALLAAREGRRKITMKDLEEAA
Template Known Secondary structure  TT
SSB
T
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   363......370.........380.........390...
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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