Job Description Q06065 Confidence 97.78% Date Thu Jan 5 12:33:23 GMT 2012 Rank 214 Aligned Residues 197 % Identity 11% Template c3te6A_ PDB info PDB header:gene regulation Chain: A: PDB Molecule:regulatory protein sir3; PDBTitle: crystal structure of the s. cerevisiae sir3 aaa+ domain Resolution 2.80 Å

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		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.						190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.						.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																													.	.	.	.	.																			.	.	.	.	.
Query SS confidence																													.	.	.	.	.																			.	.	.	.	.
Query Sequence		A	L	S	Q	A	S	V	L	I	S	G	E	S	G	T	G	K	E	L	I	A	R	A	I	H	Y	N	.	.	.	.	.	S	R	R	A	K	G	P	F	I	K	V	N	C	A	A	L	P	E	.	.	.	.	.	S	L	L	E	S	E	L	F	G	H	E	K	G	A	F	T	G	A	Q	T	L	R	Q	G	L
Query Conservation																													.	.	.	.	.																			.	.	.	.	.
Alig confidence																													.	.	.	.	.																			.	.	.	.	.
Template Conservation
Template Sequence		S	S	Q	N	K	L	F	Y	I	T	N	A	D	D	S	T	K	F	Q	L	V	N	D	V	X	D	E	L	I	T	S	S	A	R	K	E	L	P	I	F	D	Y	I	H	I	D	A	L	E	L	X	D	A	L	Y	E	K	I	W	F	A	I	S	K	E	N	G	D	I	S	L	E	A	L	N	F	Y	I	T	N
Template Known Secondary structure		T	T												S																	T	T	T	T	T	S	S										T	T															S
Template Predicted Secondary structure
Template SS confidence
		569	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.
		233	.	.	.	.	.	.			240	.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.		.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.											.																																							.
Query SS confidence									.	.											.																																							.
Query Sequence		F	E	R	A	N	E	G	.	.	T	L	L	L	D	E	I	G	E	M	.	P	L	V	L	Q	A	K	L	L	R	I	L	Q	E	R	E	F	E	R	I	G	G	H	Q	T	I	K	V	D	I	R	I	I	A	A	T	N	R	.	D	L	Q	A	M	V	K	E	G	T	F	R	E	D	L	F	Y	R	L	N	V
Query Conservation									.	.											.																																							.
Alig confidence									.	.											.													.	.	.	.	.	.	.	.	.	.	.																.							.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Template Sequence		V	P	K	A	K	K	R	K	T	L	I	L	I	Q	N	P	E	N	L	L	S	E	K	I	L	Q	Y	F	E	K	W	I	.	.	.	.	.	.	.	.	.	.	.	S	S	K	N	S	K	L	S	I	I	C	V	G	G	H	N	V	T	I	R	E	Q	.	.	.	.	I	N	I	X	P	S	L	K	A	H	F
Template Known Secondary structure		S		G	G	G	S											S	S	S			T											.	.	.	.	.	.	.	.	.	.	.			S	S											S	S							.	.	.	.			T						T	T
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Template SS confidence
		653	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.												.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.					.	.	.	710	.	.	.	.	.	.	.
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.																					.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.			.	360	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Query Sequence		I	H	L	I	L	P	P	L	R	D	R	R	E	D	I	S	L	L	A	N	H	F	L	Q	K	F	S	S	E	N	Q	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	I	D	I	D	P	M	A	M	S	L	L	T	A	W	S	W	.	.	P	G	N	I	R	E	L	S
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Alig confidence									.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation									.	.
Template Sequence		T	E	I	K	L	N	K	.	.	V	D	K	N	E	L	Q	Q	X	I	I	T	R	L	K	S	L	L	K	P	F	H	V	K	V	N	D	K	K	E	X	T	I	Y	N	N	I	P	D	N	V	I	V	I	N	H	K	I	N	N	K	I	T	Q	L	I	A	K	N	V	A	N	V	S	G	S	T	E	K	A	F
Template Known Secondary structure									.	.																											T	T											T	T																										S
Template Predicted Secondary structure									.	.
Template SS confidence
		718	.	720	.	.	.	.			.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.
		367	.	.	370	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	I	E	R	A	V	V	M	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	I	C	E	A	A	V	E	I	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		804	.	.	.	.	.	810	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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