Job Description Q06065 Confidence 99.65% Date Thu Jan 5 12:33:23 GMT 2012 Rank 122 Aligned Residues 253 % Identity 17% Template c3pvsA_ PDB info PDB header:recombination Chain: A: PDB Molecule:replication-associated recombination protein a; PDBTitle: structure and biochemical activities of escherichia coli mgsa Resolution 2.50 Å

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		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		T	S	W	Q	W	G	H	I	L	T	N	S	P	A	M	M	D	I	C	K	D	T	A	K	I	A	L	S	Q	A	S	.	V	L	I	S	G	E	S	G	T	G	K	E	L	I	A	R	A	I	H	Y	N	S	R	R	A	K	G	P	F	I	K	V	N	C	A	A	L	P	E	S	L	L	E	S	E	L	F	G
Query Conservation																																	.
Alig confidence																																	.																						.	.	.																							.	.
Template Conservation																																																							.	.	.																							.	.
Template Sequence		R	P	E	N	L	A	Q	Y	I	G	Q	Q	H	L	L	A	A	G	K	P	L	P	R	A	I	E	A	G	H	L	H	S	M	I	L	W	G	P	P	G	T	G	K	T	T	L	A	E	V	I	A	R	Y	.	.	.	A	N	A	D	V	E	R	I	S	A	V	T	S	G	V	K	E	I	R	E	A	I	.	.
Template Known Secondary structure					S	T	T	T			S						S	T	T	S									T										S	T	T	S	S												.	.	.	T	T								T	T	T											.	.
Template Predicted Secondary structure																																																							.	.	.																							.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.				.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	E	K	G	A	F	T	G	A	Q	T	L	R	Q	G	L	F	E	R	A	N	E	G	T	L	L	L	D	E	I	G	E	M	P	L	V	L	Q	A	K	L	L	R	I	L	Q	E	R	E	F	E	R	I	G	G	H	Q	T	I	K	V	D	I	R	I	I	A	A	T	N	R	D	L	Q	A	M	V	K	E	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	E	R	A	R	Q	N	R	N	A	G	R	R	T	I	L	F	V	D	E	V	H	R	F	A	.	.	.	.	.	.	F	L	P	H	I	E	D	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	I	T	F	I	G	A	T	T	E	N	P	S	F	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.									T	T									T	T	T				.	.	.	.	.	.							T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.								S	S		G	G	G	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Template SS confidence
												96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.							120	.	.	.	.	.	.	.	.														.	130	.	.	.	.	.	.	.	.	.	140	.
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	F	R	E	D	L	F	Y	R	L	N	V	I	H	L	I	L	P	P	L	R	D	R	R	E	D	I	S	L	L	A	N	H	F	L	Q	K	F	S	S	E	N	Q	R	D	I	I	D	I	D	P	M	A	M	S	L	L	T	A	W	S	W	P	G	N	I	R	E	L	S	N	V	I	E	R	A	V	V	M	N
Query Conservation
Alig confidence																					.	.	.	.																																							.
Template Conservation																					.	.	.	.																																							.
Template Sequence		E	L	N	S	A	L	L	S	R	A	R	V	Y	L	L	K	S	L	S	.	.	.	.	T	E	D	I	E	Q	V	L	T	Q	A	M	E	D	K	T	R	G	Y	G	G	Q	D	I	V	L	P	D	E	T	R	R	A	I	A	E	L	V	.	N	G	D	A	R	R	A	L	N	T	L	E	M	M	A	D	M	A
Template Known Secondary structure		S	S						T	T											.	.	.	.															T	T	T	S	S	T	T	S	S																.		S																S
Template Predicted Secondary structure																					.	.	.	.																																							.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.					.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		377	.	.	380						.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.						.	.	440			.	.	.	.
Predicted Secondary structure						.	.	.	.	.																																																										.	.	.	.	.				.	.
Query SS confidence						.	.	.	.	.																																																										.	.	.	.	.				.	.
Query Sequence		S	G	P	I	.	.	.	.	.	I	F	S	E	D	L	P	P	Q	I	R	Q	P	V	C	N	A	G	E	V	K	T	A	P	V	G	E	R	N	L	K	E	E	I	K	R	V	E	K	R	I	I	M	E	V	L	E	Q	Q	E	G	N	R	T	R	T	A	.	.	.	.	.	L	M	L	.	.	G	I	S	R
Query Conservation						.	.	.	.	.																																																										.	.	.	.	.				.	.
Alig confidence						.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.				.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	V	D	D	S	G	K	R	V	L	K	P	E	L	L	T	E	I	A	G	E	R	S	A	R	K	G	D	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	Y	D	L	I	S	A	L	H	K	S	V	R	G	S	A	P	D	A	A	L	Y	W	Y	A	R	I	I	T	A	G	G	D	P
Template Known Secondary structure			B		T	T	S														T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T	T															T	T
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.																		.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
		445	.	.	.	.	450	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	L	M	Y	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Y	V	A	R	R	C
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		289	290	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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