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Job DescriptionQ06065
Confidence98.41%DateThu Jan 5 12:33:23 GMT 2012
Rank204Aligned Residues105
% Identity20%Templatec3n70F_
PDB info PDB header:transport proteinChain: F: PDB Molecule:transport activator; PDBTitle: the crystal structure of the p-loop ntpase domain of the sigma-542 transport activator from e. coli to 2.8a
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  SPAMMDICKDTAKIALSQASVLISGESGTGKELIARAIHYNSRRAKGPFIKVNCAALPESLLESELFGHEKGAFTGAQTL
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Template Sequence  SEWINQYRRRLQQL. . . . . . . WLYGAPGTGRXTGARYLH. . . . . . . . . FVYRELTPDNAPQLNDFI. . . . . . . . . . . . . .
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   149150.........160.. .......170.........180 .........190........
 
   229230.........240.........250.........260.........270.........280.........290.........300........
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Query Sequence  RQGLFERANEGTLLLDEIGEMPLVLQAKLLRILQEREFERIGGHQTIKVDIRIIAATNRDLQAMVKEGTFREDLFYRLNV
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Template Sequence  . . . . . . . . . ALTLVLSHPEHLTREQQYHLVQL. . . . . . . . . . . . . . . . . . . . . . . QSDTSLVELAASNHIIAELYYCFAX
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   215....220.........230....... ..240.........250.........260..
 
   309310.....
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Query Sequence  IHLILPP
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Template Sequence  TQIACLP
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   279280.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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