Job Description Q06065 Confidence 99.69% Date Thu Jan 5 12:33:23 GMT 2012 Rank 116 Aligned Residues 210 % Identity 16% Template c3lufB_ PDB info PDB header:signaling protein Chain: B: PDB Molecule:two-component system response regulator/ggdef PDBTitle: structure of probable two-component system response2 regulator/ggdef domain protein Resolution 1.76 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	R	I	L	I	V	D	D	E	D	N	V	R	R	M	L	S	T	A	F	A	L	Q	G	F	E	T	H	C	A	N	N	G	R	T	A	L	H	L	F	A	D	I	H	P	D	V	V	L	M	D	I	R	M	P	E	M	D	G	I	K	A	L	K	E	M	R	S	H	E	T	R	T	P	V	I	L	M	T	A
Query Conservation
Alig confidence																																																																							.	.
Template Conservation																																																																							.	.
Template Sequence		Q	K	I	L	I	V	E	D	S	X	T	I	R	R	X	L	I	Q	A	I	A	Q	Q	T	G	L	E	I	D	A	F	D	T	L	E	G	A	R	H	C	Q	G	D	E	Y	V	V	A	L	V	D	L	T	L	P	D	A	P	S	G	E	A	V	K	V	L	L	E	R	.	.	G	L	P	V	V	I	L	T	A
Template Known Secondary structure																									S								S	S	T	G	G	G	T	T			T	T	T								S	S	B	T	T	B	T	T	S									T	.	.	T								S
Template Predicted Secondary structure																																																																							.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.			.	.	.	.	.	.	.	.	80
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.								150	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.
Query Sequence		Y	A	E	V	E	T	A	V	E	A	L	R	C	G	A	F	D	Y	V	I	K	P	F	D	L	D	E	L	N	L	I	V	Q	R	A	L	Q	L	Q	S	M	K	K	E	I	R	H	L	H	Q	A	L	S	T	S	W	Q	W	G	H	I	L	T	N	S	.	.	.	.	.	.	.	P	A	M	M	D	I	C	K
Query Conservation																																																																			.	.	.	.	.	.	.
Alig confidence																																																																			.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	I	S	E	D	K	R	E	A	W	L	E	A	G	V	L	D	Y	V	X	K	D	S	R	H	S	L	Q	Y	A	V	G	L	V	H	R	L	Y	L	N	Q	Q	I	E	V	L	V	V	D	D	S	R	T	S	R	H	R	T	X	A	Q	L	R	K	Q	L	L	Q	V	H	E	A	S	H	A	R	E	A	L	A
Template Known Secondary structure														T	T								S	S																		T	T								S														T	T	T							S	S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	A	K	I	A	L	S	Q	A	S	V	L	I	S	G	E	S	G	T	G	K	E	L	I	A	R	A	I	H	Y	N	S	R	R	A	K	G	P	F	I	K	V	N	C	A	A	L	P	E	S	L	L	E	S	E	L	F	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	L	E	Q	H	P	A	I	R	L	V	L	V	D	Y	Y	X	P	E	I	D	G	I	S	L	V	R	X	L	R	E	R	Y	S	K	Q	Q	L	A	I	I	G	I	S	V	S	D	K	R	G	L	S	A	R	Y	L	K	Q	G
Template Known Secondary structure							T	T								S			S	S	S															T	T	T	S									S	T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions