Job Description Q06065 Confidence 98.86% Date Thu Jan 5 12:33:23 GMT 2012 Rank 172 Aligned Residues 219 % Identity 22% Template c3h4mC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:proteasome-activating nucleotidase; PDBTitle: aaa atpase domain of the proteasome- activating nucleotidase Resolution 3.11 Å

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		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.												.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	T	S	W	Q	W	G	H	I	L	T	N	S	P	A	M	M	D	I	C	K	D	T	A	K	I	A	.	.	.	.	.	.	.	.	.	.	.	L	S	Q	A	S	V	L	I	S	G	E	S	G	T	G	K	E	L	I	A	R	A	I	H	Y	N	S	R	R	A	K	G	P	F	I	K	V	N	C	A	A	L
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Template Conservation																																																																		.	.	.
Template Sequence		R	P	N	V	R	Y	E	D	I	G	G	L	E	K	Q	M	Q	E	I	R	E	V	V	E	L	P	L	K	H	P	E	L	F	E	K	V	G	I	E	P	P	K	G	I	L	L	Y	G	P	P	G	T	G	K	T	L	L	A	K	A	V	A	T	E	.	.	.	T	N	A	T	F	I	R	V	V	G	S	E	L
Template Known Secondary structure		S					G	G	G			S										T	T	T	T													T					S						S	S	S	S	S	S												.	.	.	T	T								G	G	G	S
Template Predicted Secondary structure																																																																		.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.				.	.	230	.	.	.	.	.	.	.	.	.	240
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.												250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	E	S	L	L	E	S	E	L	F	G	H	E	K	G	A	F	T	G	A	Q	T	L	R	Q	G	L	F	E	R	A	N	E	G	T	L	L	L	D	E	I	G	E	M	.	.	.	.	.	.	.	.	.	.	.	P	L	V	L	Q	A	K	L	L	R	I	L	Q	E	R	E	F	E	R	I	G	G	H	Q	T
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.																																																											.	.	.	.	.	.
Template Sequence		V	K	.	.	.	.	.	.	.	.	.	K	F	I	G	E	G	A	S	L	V	K	D	I	F	K	L	A	K	E	K	A	P	S	I	I	F	I	D	E	I	D	A	I	A	A	K	R	T	D	A	L	T	G	G	D	R	E	V	Q	R	T	L	M	Q	L	L	A	E	.	.	.	.	.	.	M	D	G	F	D
Template Known Secondary structure				.	.	.	.	.	.	.	.	.		S	T	T	T	T	T													T		S								G	G	G	T	S	B			S	S	S				S	T														.	.	.	.	.	.	T	T	S	S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.																																																											.	.	.	.	.	.
Template SS confidence
		241	.										.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300							.	.	.	.	.
		275	.	.	.	.	280	.	.	.	.	.	.	.	.				.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure																.	.	.
Query SS confidence																.	.	.
Query Sequence		I	K	V	D	I	R	I	I	A	A	T	N	R	D	.	.	.	L	Q	A	M	V	K	E	G	T	F	R	E	D	L	F	Y	R	L	N	V	I	H	L	I	L	P	P	L	R	D	R	R	E	D	I	S	L	L	A	N	H	F	L	Q	K	F	S	S	E	N	Q	R	D	I	I	D	I	D	P	M	A	M	S
Query Conservation																.	.	.
Alig confidence																.	.	.												.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	R	G	D	V	K	I	I	G	A	T	N	R	P	D	I	L	D	P	A	I	L	R	P	G	R	F	D	.	.	.	.	.	.	.	R	I	I	E	V	P	A	P	D	E	K	G	R	L	E	.	.	.	.	.	.	.	.	.	.	.	.	I	L	K	I	H	T	R	K	M	N	L	A	E	D	V	N	L	E
Template Known Secondary structure		S	S	S	S								S	S	G	G	G	B						S	T	T	S			.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.					T	T	T	T	S		B		S	S
Template Predicted Secondary structure																														.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.								.	.	.	.	.	.	340	.	.	.	.	.	.	.	.													.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.				.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure																											.	.	.
Query SS confidence																											.	.	.
Query Sequence		L	L	T	A	W	S	W	P	G	N	I	R	E	L	S	N	V	I	E	R	A	V	V	M	N	.	.	.	S	G	P	I	I	F	S	E	D	L	P	P	Q	I	R	Q
Query Conservation																											.	.	.
Alig confidence																											.	.	.
Template Conservation
Template Sequence		E	I	A	K	M	T	E	G	C	V	G	A	E	L	K	A	I	C	T	E	A	G	M	N	A	I	R	E	L	R	D	Y	V	T	M	D	D	F	R	K	A	V	E	K
Template Known Secondary structure					T	T	S	T	T																				T	T		S	S	B
Template Predicted Secondary structure
Template SS confidence
		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions