Job Description Q06065 Confidence 99.31% Date Thu Jan 5 12:33:23 GMT 2012 Rank 148 Aligned Residues 60 % Identity 28% Template c3e7lD_ PDB info PDB header:transcription regulator Chain: D: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: crystal structure of sigma54 activator ntrc4's dna binding2 domain Resolution 2.25 Å

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		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	T	A	P	V	G	E	R	N	L	K	E	E	I	K	R	V	E	K	R	I	I	M	E	V	L	E	Q	Q	E	G	N	R	T	R	T	A	L	M	L	G	I	S	R	R	A	L	M	Y	K	L	Q	E	Y	G	I	D	P	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	S	Y	L	L	K	I	K	E	L	K	E	A	K	K	E	F	E	K	I	F	I	E	E	K	L	R	E	Y	D	Y	D	L	K	R	T	A	E	E	I	G	I	D	L	S	N	L	Y	R	K	I	K	S	L	N	I	R	V	K
Template Known Secondary structure				G	G	G	G	G		S																					T	T	T									T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions