Job Description Q06065 Confidence 99.55% Date Thu Jan 5 12:33:23 GMT 2012 Rank 127 Aligned Residues 127 % Identity 13% Template c2yxbA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:coenzyme b12-dependent mutase; PDBTitle: crystal structure of the methylmalonyl-coa mutase alpha-subunit from2 aeropyrum pernix Resolution 1.80 Å

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		5	.	.	.	.	10					.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.				.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure								.	.	.	.																							.	.	.																																	.	.
Query SS confidence								.	.	.	.																							.	.	.																																	.	.
Query Sequence		N	R	I	L	I	V	.	.	.	.	D	D	E	D	N	V	R	R	M	L	S	T	A	F	A	L	Q	G	F	E	T	H	.	.	.	C	A	N	N	G	R	T	A	L	H	L	F	A	D	I	H	P	D	V	V	L	M	D	I	R	M	P	E	M	D	G	I	.	.	K	A	L	K	E	M	R	S	H	E	T
Query Conservation								.	.	.	.																							.	.	.																																	.	.
Alig confidence								.	.	.	.																							.	.	.																																	.	.
Template Conservation
Template Sequence		Y	K	V	L	V	A	K	X	G	L	D	G	H	D	R	G	A	K	V	V	A	R	A	L	R	D	A	G	F	E	V	V	Y	T	G	L	R	Q	T	P	E	Q	V	A	X	A	A	V	Q	E	D	V	D	V	I	G	V	S	I	L	N	G	A	H	L	H	L	X	K	R	L	X	A	K	L	R	E	L	G	A
Template Known Secondary structure										S	S	S	S															T	T								S	B													T	T		S							S	S	S																T	T
Template Predicted Secondary structure
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	P	V	I	L	M	T	A	Y	A	E	V	E	T	A	V	E	A	L	R	C	G	A	F	D	Y	V	I	K	P	F	D	L	D	E	L	N	L	I	V	Q	R	A	L	Q	L	Q	S	M	K	K	E	I	R	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	D	I	P	V	V	L	G	G	T	I	P	I	P	D	L	E	P	L	R	S	L	G	I	R	E	I	F	L	P	G	T	S	L	G	E	I	I	E	K	V	R	K	L	A	E	E	K	R	X	R	E	E	A	E	A
Template Known Secondary structure		T	T	S																			T	T							T	T																							T
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions