Return to main results Retrieve Phyre Job Id

Job DescriptionQ06065
Confidence91.91%DateThu Jan 5 12:33:23 GMT 2012
Rank353Aligned Residues37
% Identity24%Templatec2xzlA_
PDB info PDB header:hydrolase/rnaChain: A: PDB Molecule:atp-dependent helicase nam7; PDBTitle: upf1-rna complex
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   150.........160.........170.........180......
Predicted Secondary structure 

















Query SS confidence 




































Query Sequence  PAMMDICKDTAKIALSQASVLISGESGTGKELIARAI
Query Conservation    
  
   
   
    



 

 



   
  
Alig confidence 




































Template Conservation    

 

  

   
   












 

  
Template Sequence  AQLNSSQSNAVSHVLQRPLSLIQGPPGTGKTVTSATI
Template Known Secondary structure 



TT
S
STTSS
Template Predicted Secondary structure 














Template SS confidence 




































   407..410.........420.........430.........440...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions