|   |
40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | |
|
|
|
|
|
. | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | 100 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
| . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | L | H | L | F | A | D | I | H | P | D | V | V | L | M | D | I | R | M | P | E | M | D | . |
. |
. |
. |
. |
. |
G | I | K | A | L | K | E | M | R | S | H | E | T | R | T | P | V | I | L | M | T | A | Y | A | E | V | E | T | A | V | E | A | L | . |
. |
. |
. |
. |
. |
. |
. |
R | C | G | A | F | D | Y | V | I | K |
Query Conservation |   |
|   |   |   |
|   |   |   |   |
|
|
|
|
|   |
|   |   |
|
|   |   |   | . | . | . | . | . | . |
|   |   |   |
|   |   |
|
|   |   |   |   |   |   |
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |
|
| . | . | . | . | . | . | . | . |   |   |
|
|   |
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |
|
|   |   |   |
|   |
|
|
|
|
|
|
|
|   |   |
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   | . | . |
|   |
|
|
|
|
|
| . | . |
|
|   |   |   |
|   |   |   |
|
|   |
|   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |
Template Sequence |   |
A | I | A | A | A | L | L | R | N | A | T | F | Y | F | F | D | E | P | S | S | Y | L | D | I | R | Q | R | L | N | A | A | R | A | I | R | R | L | S | E | E | . |
. |
G | K | S | V | L | V | V | E | . |
. |
H | D | L | A | V | L | D | Y | L | S | D | I | I | H | V | V | Y | G | E | P | G | V | Y | G | I | F | S | Q |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | S |
|
| S |  |  |  |  |  | S | T | T | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | . | . | T |
|  |  |  |  |  |
| . | . | S |
|  |  |  |  |  |  |  |
| S |  |  |  |  |  |  |  |  | T | T | T |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|  |  |  |  |  |  | . | . |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | |
|
260 | . | . | . | . | . | . | . | |
|
. | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . |
  |
  |   |
106 | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | F | D | L | D | E | L | N | L | I | V | Q | R | A | L | Q | L | Q | S | M | K | K | E | I | R | H | L | H | Q | A | L | S | T | S | W | Q | W | G | H | I | L | T | N | S | P | A | M | M | D | . |
. |
. |
. |
. |
. |
. |
. |
I | C | K | D | T | A | K | I | A | L | S | Q | A | S | V | L | I | S | G | E | S | G | T |
Query Conservation |   |
|   |   |   |   |   |
|   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|
|   |
|   |   |
|   |   | . | . | . | . | . | . | . | . |
|   |   |   |
|   |   |   |
|   |   |   |   |
|
|
|
|   |
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |
|
|   |   |   |
|
|
|   |
|
|
|
Template Sequence |   |
P | K | G | T | R | N | G | I | N | E | F | L | R | G | Y | L | K | D | E | N | V | R | F | R | P | Y | E | I | K | F | T | K | T | G | E | R | V | E | I | E | R | E | T | L | V | T | Y | P | R | L | V | K | D | Y | G | S | F | R | L | E | V | E | P | G | E | I | K | K | G | E | V | I | G | I | V | G | P | N | G | I |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  | T |  |  | T | T | T | T |  |  |
| S | S | S |
|
|
|
|
|
| S | S | G | G | G | S | S |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  | T | T |  |  |  |  |  |
|
|  |  |  |  | T | T |
|  |  |  |  |  |
|
| T | T | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
296 | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . |
  |
  |   |
178 | . | 180 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | K | E | L | I | A | R | A | I |
Query Conservation |   |
|
|   |   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|   |
|
Template Sequence |   |
G | K | T | T | F | V | K | X | L |
Template Known Secondary structure |   |
S |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
  |   |
376 | . | . | . | 380 | . | . | . | . |
  |