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Job DescriptionQ06065
Confidence93.43%DateThu Jan 5 12:33:23 GMT 2012
Rank283Aligned Residues110
% Identity20%Templatec1w36G_
PDB info PDB header:recombinationChain: G: PDB Molecule:exodeoxyribonuclease v alpha chain; PDBTitle: recbcd:dna complex
Resolution3.1 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   156...160.........170.........180....... ..190.........200.........210.........220.........230..
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Query Sequence  CKDTAKIALSQASVLISGESGTGKELIARAIH. . . YNSRRAKGPFIKVNCAALPESLLESELFGHEKGAFTGAQTLRQGL
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Template Sequence  QKVAAAVALTRRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLPLTDEQKKRI
Template Known Secondary structure  TBS

TTSTT
SSS


BSSTSTT

S



S
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   154.....160.........170.........180.........190.........200.........210.........220.........230...
 
   233..... .240.........250.........260.....
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Query Sequence  FERANE. . . . . . . . . . . . . GTLLLDEIGEMPLVLQAKLLRILQERE
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Template Sequence  PEDASTLHRLLHAGNPLHLDVLVVDEASMIDLPMMSRLIDALPDHA
Template Known Secondary structure  S


BTTTS


TTS

S
S
SGGG
BS
TT
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   234.....240.........250.........260.........270.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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