Job Description Q06065 Confidence 98.66% Date Thu Jan 5 12:33:23 GMT 2012 Rank 190 Aligned Residues 209 % Identity 24% Template c1iy2A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:atp-dependent metalloprotease ftsh; PDBTitle: crystal structure of the ftsh atpase domain from thermus2 thermophilus Resolution 3.20 Å

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		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.											.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	W	G	H	I	L	T	N	S	P	A	M	M	D	I	C	K	D	T	A	K	I	.	.	.	.	.	.	.	.	.	.	A	L	S	Q	A	S	V	L	I	S	G	E	S	G	T	G	K	E	L	I	A	R	A	I	H	Y	N	S	R	R	A	K	G	P	F	I	K	V	N	C	A	A	L	P	E	S	L	L
Query Conservation																								.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.																												.	.	.
Template Conservation																																																													.	.	.
Template Sequence		T	F	K	D	V	A	G	A	E	E	A	K	E	E	L	K	E	I	V	E	F	L	K	N	P	S	R	F	H	E	M	G	A	R	I	P	K	G	V	L	L	V	G	P	P	G	V	G	K	T	H	L	A	R	A	V	A	G	E	.	.	.	A	R	V	P	F	I	T	A	S	G	S	D	F	V	E	M	F	V
Template Known Secondary structure			G	G	G	S	S	S																								T	T													T	T	S	S												.	.	.	T	T														S	T	T
Template Predicted Secondary structure																																																													.	.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.				.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.							250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.
Query Sequence		E	S	E	L	F	G	H	E	K	G	A	F	T	G	A	Q	T	L	R	Q	G	L	F	E	R	A	N	E	G	T	L	L	L	D	E	I	G	E	M	.	.	.	.	.	.	P	L	V	L	Q	A	K	L	L	R	I	L	Q	E	R	E	F	E	R	I	G	G	H	Q	T	I	K	V	D	I	R	I	I	A	A
Query Conservation																																									.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.
Template Sequence		G	V	G	A	.	.	.	.	.	.	.	.	.	A	R	V	R	D	L	F	E	T	A	K	R	H	A	P	C	I	V	F	I	D	E	I	D	A	V	G	R	K	N	D	E	R	E	Q	T	L	N	Q	L	L	V	E	M	D	G	.	.	.	.	.	.	.	.	.	F	E	K	D	T	A	I	V	V	M	A	A
Template Known Secondary structure		T				.	.	.	.	.	.	.	.	.												T	S		S							T																							T	T	.	.	.	.	.	.	.	.	.			T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.
Template SS confidence
		231	.	.	.										.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280										.	.	.	.	.	.	.	.	.	290	.	.
		285	.	.	.				.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure						.	.	.																																																																									.
Query SS confidence						.	.	.																																																																									.
Query Sequence		T	N	R	D	.	.	.	L	Q	A	M	V	K	E	G	T	F	R	E	D	L	F	Y	R	L	N	V	I	H	L	I	L	P	P	L	R	D	R	R	E	D	I	S	L	L	A	N	H	F	L	Q	K	F	S	S	E	N	Q	R	D	I	I	D	I	D	P	M	A	M	S	L	L	T	A	W	S	W	P	G	.
Query Conservation						.	.	.																																																																									.
Alig confidence						.	.	.												.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.																								.				.
Template Conservation																				.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Sequence		T	N	R	P	D	I	L	D	P	A	L	L	R	P	G	R	F	D	.	.	.	.	.	.	.	R	Q	I	A	I	D	A	P	D	V	K	G	R	E	Q	.	.	.	.	.	.	.	.	.	.	.	.	I	L	R	I	H	A	R	G	K	P	L	A	E	D	V	D	L	A	L	L	A	K	R	.	T	P	G	F
Template Known Secondary structure			S		T	T	S	S						S	T	T	S	S		.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.							T	T	S		B		T	T									T	.		T	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.																								.
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.								.	320	.	.	.	.	.	.	.	.	.	330	.	.	.													.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.		.	.	.	360
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.				.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure																		.	.	.
Query SS confidence																		.	.	.
Query Sequence		N	I	R	E	L	S	N	V	I	E	R	A	V	V	M	N	.	.	.	S	G	P	I	I	F	S	E	D	L	P	P	Q	I
Query Conservation																		.	.	.
Alig confidence																		.	.	.
Template Conservation
Template Sequence		V	G	A	D	L	E	N	L	L	N	E	A	A	L	L	A	A	R	E	G	R	R	K	I	T	M	K	D	L	E	E	A	A
Template Known Secondary structure																				T	T			S	B									T
Template Predicted Secondary structure
Template SS confidence
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions