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Job DescriptionP0ACR7
Confidence67.35%DateThu Jan 5 11:18:49 GMT 2012
Rank286Aligned Residues208
% Identity8%Templatec3fj7A_
PDB info PDB header:protein bindingChain: A: PDB Molecule:major antigenic peptide peb3; PDBTitle: crystal structure of l-phospholactate bound peb3
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   95....100.........110.........120.........130.........140.........150 .........160....
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Query Sequence  VRVAASQTISAHLIPQCIAESHRRYPDIQFVLHDRPQQWVMESIRQGDVDFGIVID. . . . . . . . . . PGPVGDLQCEAILS
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Template Sequence  VNLYGPGGPHTALKD. IANKYSE. KTGVKVNVNFGPQATWFEKAKKDADILFGASDQSALAIASDFGKDFNVSKIKPLYF
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TTT..


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   22.......30...... ...40... ......50.........60.........70.........80.........90.........
 
   165....170.........180.........190.........200.........210....... ..220.........230....
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Query Sequence  EPFFLLCHRDSALAVEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQA. . . . . . . . . . NIVQEIGHPATLFPMVA
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Template Sequence  REAIILTQKGNPLKIKGLKDLANKKVRIVVPEGAGKSNTSGTGVWEDMIGRTQDIKTIQNFRNNIVAFVPNSGSARKLFA
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TT


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   100.........110.........120.........130.........140.........150.........160.........170.........
 
   235....240.........250.........260.........270.........280.........290 .........300....
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Query Sequence  AGIGISILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR. DQGNALMAGREGDP
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Template Sequence  QDQADAWITWIDWSKSNPDIGTAVAIEKDLVVYRTFNVIAKEGASKETQDFIAYLSSKEAKEIFKKYGWRE
Template Known Secondary structure  TT

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   180.........190.........200.........210.........220.........230.........240.........250
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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