 |
Job Description | P0ACR7 | Confidence | 96.90% | Date | Thu Jan 5 11:18:49 GMT 2012 |
Rank | 98 | Aligned Residues | 87 |
% Identity | 18% | Template | c2oqgA_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:possible transcriptional regulator, arsr family protein; |
PDBTitle: arsr-like transcriptional regulator from rhodococcus sp. rha1
|
Resolution | 1.54 Å |
|
 |
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | |
. | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | |
|
. | . | . | 60 | . | . | . | |
. | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
| . | . |  |  |  |
|  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | L | K | Q | L | K | V | F | V | T | V | A | Q | E | K | . |
S | F | S | R | A | G | E | R | I | G | L | S | Q | S | A | V | S | H | S | V | K | E | L | E | N | H | T | G | V | R | L | L | D | R | T | T | R | E | . |
. |
V | V | L | T | D | A | G | . |
Q | Q | L | A | L | R | L | E | R | L | L | D | E | L | N | S |
Query Conservation |   |
  |
|   |   |
|   |   |
|   |   |
|   |
|   |
| . |
|   |
|   |
|
|   |   |
|   |
|
|
|
|
|
|
|   |   |
|   |   |
|
|   |   |
|
|   |   |
|
|   |
|   |   |   |   | . | . |   |   |
|
|   |   |
| . |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|   |
|
|   |   |
|   |   |   |   |   |   |
|   |
|
|
|   |   |
|   |
|
|   |   |
|
|
|   |
|
|   |   |
|   |   |
| . |
|
|
|   |   |   |
|   |
|
|   |   |   |
|   |
|   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
D | E | T | R | W | E | I | L | T | E | L | G | R | A | D | Q | S | A | S | S | L | A | T | R | L | P | V | S | R | Q | A | I | A | K | H | L | N | A | L | Q | A | C | . |
G | L | V | E | S | V | K | V | G | R | E | I | R | Y | R | A | L | G | A | E | L | N | K | T | A | R | T | L | E | R | I | G | A | E | W | D | R |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  | S |
| B |
|  |  |  |  |  |  |  | S | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | . | T | S |  |  |  |  |  |  | T | T |  |  |  |  |  |  |
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
18 | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | |
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . |
  |
  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | L | R | D | T | G | R | M | G | Q | Q | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|   |   |   |   |
|
|   |
Template Sequence |   |
R | L | A | A | I | K | Q | I | A | E | S | X |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
97 | . | . | 100 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|