 |
Job Description | P0ACL2 | Confidence | 94.43% | Date | Thu Jan 5 11:18:25 GMT 2012 |
Rank | 119 | Aligned Residues | 48 |
% Identity | 17% | Template | d2cyya1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| Lrp/AsnC-like transcriptional regulator N-terminal domain
|
Resolution | 1.80 |
|
  |   |
15 | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | D | L | K | E | R | I | E | Q | G | V | Y | L | V | G | D | K | L | P | A | E | R | F | I | A | D | E | K | N | V | S | R | T | V | V | R | E | A | I | I | M | L | E | V | E | G | Y | V | E | V |
Query Conservation |   |
  |   |
|   |   |   |
|   |   |
|   |
|   |
|
|   |   |
|
|
|
|   |
|
|
|   |   |   |
|
|
|
|   |   |
|
|
|
|
|   |   |
|   |   |   |
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |
|
|   | . |   |
|   |   |   |   |
|   | . |
|   |   |
|
|
|   |   |
|
|
|
|   |   |
|
|   |   |
|
|   |   |
|   |   |   |
|
|
|   |   |
Template Sequence |   |
D | E | I | D | K | K | I | I | K | . |
I | L | Q | N | D | G | K | A | . |
P | L | R | E | I | S | K | I | T | G | L | A | E | S | T | I | H | E | R | I | R | K | L | R | E | S | G | V | I | K | K |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  | . |  |  |  |  |
| T | T |
| . |
|  |  |  |  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S | S |
|
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  | . |  |  |  |  |
|
|
|
| . |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
6 | . | . | . | 10 | . | . | . | . | |
. | . | . | . | . | 20 | . | . | |
. | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|