Job Description P0ACL2 Confidence 71.22% Date Thu Jan 5 11:18:25 GMT 2012 Rank 272 Aligned Residues 90 % Identity 8% Template d1yg2a_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain PadR-like Resolution 2.20

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	N	V	S	R	T	V	V	R	E	A	I	I	M	L	E	V	E	G	Y	V	E	V	R	K	G	S	G	I	H	V	V	S	N	Q	P	R	H	Q	Q	A	A	D	N	N	M	E	F	A	N	Y	G	P	F	E	L	L	Q	A	R	Q	L	I	E	S	N	I	A	E	F	A	A	T	Q	V	T	K	Q	D	I
Query Conservation
Alig confidence																							.																						.
Template Conservation																							.																						.
Template Sequence		W	K	A	S	H	Q	Q	V	Y	R	E	L	N	K	M	G	E	Q	G	L	V	.	T	C	V	L	E	V	Y	S	I	T	Q	A	G	R	S	A	L	G	E	W	F	.	D	Q	P	T	A	H	P	T	V	R	D	E	F	S	A	K	L	M	A	C	S	V	Q	S	A	E	P	Y	R	L	Q	L	A	E	L	V
Template Known Secondary structure																			T	T	S		.																						.		S																	G	G	G	T	S
Template Predicted Secondary structure																							.																						.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		122	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	L	M	A	I	Q	E	Q	A	R	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	E	S	R	K	L	V	A	H	Y	Q	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions