Job Description P0ACL2 Confidence 94.39% Date Thu Jan 5 11:18:25 GMT 2012 Rank 121 Aligned Residues 77 % Identity 13% Template c3pqkD_ PDB info PDB header:transcription Chain: D: PDB Molecule:biofilm growth-associated repressor; PDBTitle: crystal structure of the transcriptional repressor bigr from xylella2 fastidiosa Resolution 2.09 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.				70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.
Query SS confidence																																																															.	.	.
Query Sequence		L	Y	Q	Q	L	A	A	D	L	K	E	R	I	E	Q	G	V	Y	L	V	G	D	K	L	P	A	E	R	F	I	A	D	E	K	N	V	S	R	T	V	V	R	E	A	I	I	M	L	E	V	E	G	Y	V	E	V	R	K	G	S	G	.	.	.	I	H	V	V	S	N	Q	P	R	H	Q	Q	A	A	D	N
Query Conservation																																																															.	.	.
Alig confidence																				.	.	.	.	.	.	.																																					.	.	.
Template Conservation																				.	.	.	.	.	.	.
Template Sequence		L	S	H	P	V	R	L	X	L	V	C	T	L	V	E	G	E	F	.	.	.	.	.	.	.	S	V	G	E	L	E	Q	Q	I	G	I	G	Q	P	T	L	S	Q	Q	L	G	V	L	R	E	S	G	I	V	E	T	R	R	N	I	K	Q	I	F	Y	R	L	T	E	A	K	A	A	Q	L	V	N	A	L	Y
Template Known Secondary structure				S												T			B	.	.	.	.	.	.	.										T			T	T												T	T	S						S	S	S								S	S	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.								50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		86	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	M	E	F	A	N	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	I	F	C	A	Q	E
Template Known Secondary structure				T	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions