Job Description P0ACL2 Confidence 99.98% Date Thu Jan 5 11:18:25 GMT 2012 Rank 2 Aligned Residues 204 % Identity 20% Template c3fmsA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, gntr family; PDBTitle: crystal structure of tm0439, a gntr transcriptional2 regulator Resolution 2.20 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Y	Q	Q	L	A	A	D	L	K	E	R	I	E	Q	G	V	Y	L	V	G	D	K	L	P	A	E	R	F	I	A	D	E	K	N	V	S	R	T	V	V	R	E	A	I	I	M	L	E	V	E	G	Y	V	E	V	R	K	G	S	G	I	H	V	V	S	N	Q	P	R	H	Q	Q	A	A	D	N	N	M	E
Query Conservation
Alig confidence																											.
Template Conservation																											.
Template Sequence		V	R	T	K	V	Y	N	L	L	K	E	X	I	L	N	H	E	L	K	L	G	E	K	L	N	.	V	R	E	L	S	E	K	L	G	I	S	F	T	P	V	R	D	A	L	L	Q	L	A	T	E	G	L	V	K	V	V	P	R	V	G	F	F	V	T	D	V	D	E	K	F	I	R	E	T	I	E	T	R	I
Template Known Secondary structure																T	T	S	S		T	T		B			.									T																	T	S					T	T	T
Template Predicted Secondary structure																											.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	N	Y	G	P	F	E	L	L	Q	A	R	Q	L	I	E	S	N	I	A	E	F	A	A	T	Q	V	T	K	Q	D	I	M	K	L	M	A	I	Q	E	Q	A	R	G	E	Q	C	F	R	D	S	E	W	D	L	Q	F	H	I	Q	V	A	L	A	T	Q	N	S	A	L	A	A	I	V	E	K	M	W	T
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		X	X	E	V	F	C	L	E	N	Y	F	D	K	I	A	G	S	E	E	L	L	E	I	.	.	.	.	.	.	.	.	.	.	.	.	K	G	E	I	D	D	V	A	A	S	A	A	R	E	I	F	D	D	S	D	E	R	L	H	K	L	F	I	R	A	S	G	N	E	L	I	I	S	L	Y	E	K	I	W	D
Template Known Secondary structure											S						T								.	.	.	.	.	.	.	.	.	.	.	.																														T	T												T
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110													.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	S	H	N	P	Y	W	K	K	L	H	E	H	I	D	S	R	T	V	D	N	W	C	D	D	H	D	Q	I	L	K	A	L	I	R	K	D	P	H	A	A	K	L	A	M	W	Q	H	L	E	N	T	K	I	M	L	F	N	E	T	S	D	D	F
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.
Template Sequence		R	I	D	L	V	R	H	.	.	.	.	.	.	.	.	L	N	E	R	Y	V	V	S	N	R	E	H	K	E	L	I	E	R	I	I	S	G	D	K	E	G	A	I	E	K	L	K	E	H	L	K	N	V	E	A	E	T	I	K	N	L	Y	T	Y	E
Template Known Secondary structure									.	.	.	.	.	.	.	.	T																				T	T																								G	G	G	S	S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.									.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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