Job Description P0ACL2 Confidence 42.23% Date Thu Jan 5 11:18:25 GMT 2012 Rank 411 Aligned Residues 48 % Identity 17% Template c2zxjB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcriptional regulatory protein walr; PDBTitle: crystal structure of yycf dna-binding domain from staphylococcus2 aureus Resolution 1.87 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.						.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.									.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.																	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.																	.	.	.	.	.	.	.	.
Query Sequence		L	V	G	D	K	L	P	A	E	R	F	I	A	D	E	K	.	.	.	.	.	N	V	S	R	T	V	V	R	E	A	I	I	M	L	E	V	.	.	.	.	.	.	.	.	E	G	Y	V	E	V	R	K	G	S	G	I	H	V	V	S	N
Query Conservation																		.	.	.	.	.																	.	.	.	.	.	.	.	.
Alig confidence								.										.	.	.	.	.																	.	.	.	.	.	.	.	.
Template Conservation								.
Template Sequence		H	M	G	Q	V	M	.	T	R	E	H	L	L	Q	T	V	W	G	Y	D	Y	F	G	D	V	R	T	V	D	V	T	I	R	R	L	R	E	K	I	E	D	D	P	S	H	P	E	Y	I	V	T	R	R	G	V	G	Y	F	L	Q	Q	H
Template Known Secondary structure		T	T	T				.										T		T	T			S		T																S	S	T	T	S		S	S					T	T	T
Template Predicted Secondary structure								.
Template SS confidence
		172	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions