 |
Job Description | P0ACL2 | Confidence | 96.97% | Date | Thu Jan 5 11:18:25 GMT 2012 |
Rank | 38 | Aligned Residues | 72 |
% Identity | 19% | Template | c2y75F_ |
PDB info |
PDB header:transcription | Chain: F: PDB Molecule:hth-type transcriptional regulator cymr; |
PDBTitle: the structure of cymr (yrzc) the global cysteine regulator2 of b. subtilis
|
Resolution | 2.00 Å |
|
 |
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | |
. | 70 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
| . |  |  |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | E | I | T | E | P | R | R | L | Y | Q | Q | L | A | A | D | L | K | E | R | I | E | Q | G | V | Y | L | V | G | D | K | L | P | A | E | R | F | I | A | D | E | K | N | V | S | R | T | V | V | R | E | A | I | I | M | L | E | V | E | G | Y | V | E | V | R | K | G | S | . |
G | I | H | V | V | S | N | Q | P | R | H |
Query Conservation |   |
|   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |
|   |   |   |
|   |   |
|   |
|   |
|
|   |   |
|
|
|
|   |
|
|
|   |   |   |
|
|
|
|   |   |
|
|
|
|
|   |   |
|   |   |   |
|
|
|   |   |   |   |
|   | . |
|   |   |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |   |   |   |
|
|
|   |   |
|   |   |
| . | . | . | . | . | . |
|   |   |   |   |   |   |   |   | . |
|   |   |   |
|
|   |   |   |   |
|   |   |   |   |
|   |
|
|
|   |   |
|   |   |   |
|
|
|   |
|   |   |
|   |   |
|
|
|   |
|   |
|   |   |   |   |
Template Sequence |   |
L | K | I | S | T | K | G | R | Y | G | L | T | I | M | I | E | L | . |
. |
. |
. |
. |
. |
A | K | K | H | G | E | G | P | T | . |
S | L | K | S | I | A | Q | T | N | N | L | S | E | H | Y | L | E | Q | L | V | S | P | L | R | N | A | G | L | V | K | S | I | R | G | A | Y | G | G | Y | V | L | G | S | E | P | D | A |
Template Known Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  | T | T | T | S |
|
| B | . |
|  |  |  |  |  |  |  | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |
| S | T | T |
|  |  |  |  | S | S |
| G | G | G |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |
|
|
|
|
|
|
| . |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
. | 20 | . | . | . | . | . | . | . | |
. | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|