Job Description P0ACL2 Confidence 44.80% Date Thu Jan 5 11:18:25 GMT 2012 Rank 388 Aligned Residues 44 % Identity 20% Template c2k9lA_ PDB info PDB header:transcription Chain: A: PDB Molecule:rna polymerase sigma factor rpon; PDBTitle: structure of the core binding domain of sigma54 Resolution UNK

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	L	A	A	D	L	K	E	R	I	E	Q	G	V	Y	L	V	G	D	K	L	P	A	E	R	F	I	A	D	E	K	N	V	S	R	T	V	V	R	E	A	I	I	M	L	E	V
Query Conservation
Alig confidence																					.	.	.	.
Template Conservation																					.	.	.	.
Template Sequence		Q	E	L	A	L	E	L	L	N	Y	L	N	E	K	G	F	L	S	K	.	.	.	.	S	V	E	E	I	S	D	V	L	R	C	S	V	E	E	L	E	K	V	R	Q	K	V	L	R
Template Known Secondary structure													T	T	S	S	T	T			.	.	.	.										T	S														T
Template Predicted Secondary structure																					.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.					.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions