Job Description P0ACL2 Confidence 100.00% Date Thu Jan 5 11:18:25 GMT 2012 Rank 1 Aligned Residues 220 % Identity 19% Template c2di3A_ PDB info PDB header:transcription Chain: A: PDB Molecule:bacterial regulatory proteins, gntr family; PDBTitle: crystal structure of the transcriptional factor cgl29152 from corynebacterium glutamicum Resolution 2.05 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	Y	Q	Q	L	A	A	D	L	K	E	R	I	E	Q	G	V	Y	L	V	G	D	K	L	P	A	E	R	F	I	A	D	E	K	N	V	S	R	T	V	V	R	E	A	I	I	M	L	E	V	E	G	Y	V	E	V	R	K	G	S	G	I	H	V	V	S	N	Q	P	R	H	Q	Q	A	A	D	N	N	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	A	H	E	S	V	M	D	W	V	T	E	E	L	R	S	G	R	L	K	I	G	D	H	L	P	S	E	R	A	L	S	E	T	L	G	V	S	R	S	S	L	R	E	A	L	R	V	L	E	A	L	G	T	I	S	T	A	T	G	S	G	P	R	S	G	T	I	I	T	A	A	P	G	Q	A	L	S	L	S
Template Known Secondary structure																		T	S	S		T	T		B												T																	T	S					S	T	T	S	G	G	G										S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		88	.	90	.	.	.	.						.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure									.	.	.	.	.
Query SS confidence									.	.	.	.	.
Query Sequence		E	F	A	N	Y	G	P	.	.	.	.	.	F	E	L	L	Q	A	R	Q	L	I	E	S	N	I	A	E	F	A	A	T	Q	V	T	K	Q	D	I	M	K	L	M	A	I	Q	E	Q	A	R	G	E	Q	C	F	R	D	S	E	W	D	L	Q	F	H	I	Q	V	A	L	A	T	Q	N	S	A	L	A	A	I
Query Conservation									.	.	.	.	.
Alig confidence									.	.	.	.	.
Template Conservation
Template Sequence		V	T	L	Q	L	V	T	N	Q	V	G	H	H	D	I	Y	E	T	R	Q	L	L	E	G	W	A	A	L	H	S	S	A	E	R	G	D	W	D	V	A	E	A	L	L	E	K	M	D	D	P	S	L	P	L	E	D	F	L	R	F	D	A	E	F	H	V	V	I	S	K	G	A	E	N	P	L	I	S	T	L
Template Known Secondary structure								T	T	S	S																			T	B		T	T	T	S												T	T		T	T	S																		T	T	B	S	S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	K	M	W	T	Q	R	S	H	N	P	Y	W	K	K	L	H	E	H	I	D	S	R	T	V	D	N	W	C	D	D	H	D	Q	I	L	K	A	L	I	R	K	D	P	H	A	A	K	L	A	M	W	Q	H	L	E	N	T	K	I	M	L	F	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	E	A	L	R	L	S	V	A	D	H	T	V	A	R	A	R	A	L	P	D	W	R	A	T	S	A	R	L	Q	K	E	H	R	A	I	L	A	A	L	R	A	G	E	S	T	V	A	A	T	L	I	K	E	H	I	E	G	Y	Y	E	E	T	A	A
Template Known Secondary structure																		T	T		S																						T	T
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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