Job Description P67697 Confidence 97.16% Date Thu Jan 5 12:10:47 GMT 2012 Rank 58 Aligned Residues 58 % Identity 33% Template c3kwrA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:putative rna-binding protein; PDBTitle: crystal structure of putative rna-binding protein (np_785364.1) from2 lactobacillus plantarum at 1.45 a resolution Resolution 1.45 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	Y	P	V	T	L	T	P	A	P	E	G	G	Y	M	V	S	F	V	D	I	P	E	A	L	T	Q	G	E	T	V	A	E	A	M	E	A	A	K	D	A	L	L	T	A	F	D	F	Y	F	E	D	N	E	L	I	P	L	P	S	P	L	N
Query Conservation
Alig confidence										.																																								.	.	.	.	.
Template Conservation										.																																								.	.	.	.	.
Template Sequence		V	K	Y	P	A	I	F	R	.	D	E	G	T	Y	W	D	V	R	F	P	D	V	P	A	A	Q	T	F	G	A	S	V	Q	V	A	A	D	N	A	A	N	A	L	A	I	A	L	F	.	.	.	.	.	E	Q	S	L	P	P	A	S	D	P	Q
Template Known Secondary structure										.			S	S	S						T	T		G	G	G					S	S																	T	.	.	.	.	.	T	S								G	G
Template Predicted Secondary structure										.																																								.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.						.	.	.	.	.	60	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions