Job Description P67697 Confidence 98.31% Date Thu Jan 5 12:10:47 GMT 2012 Rank 55 Aligned Residues 95 % Identity 15% Template c3gn5B_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:hth-type transcriptional regulator mqsa (ygit/b3021); PDBTitle: structure of the e. coli protein mqsa (ygit/b3021) Resolution 2.15 Å

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		14	.	.	.	.	.	20	.	.	.	.			.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		G	Y	M	V	S	F	V	D	I	P	E	.	.	A	L	T	Q	G	E	T	V	A	E	A	M	E	A	A	K	D	A	L	L	T	A	F	D	F	Y	F	E	D	N	E	L	I	P	L	P	S	P	L	N	S	H	D	H	F	I	E	V	P	L	S	V	A	S	K	V	L	L	L	N	A	F	L	Q	S	E	I
Query Conservation													.	.
Alig confidence													.	.												.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	R	K	T	V	L	K	G	I	H	G	L	Y	C	V	H	C	E	E	S	I	M	N	K	.	E	E	S	D	A	F	M	A	Q	V	K	A	F	R	A	S	V	N	A	E	T	V	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	F	I	V	K	V	R	K	K	L	S	L
Template Known Secondary structure		T														T	T	T								.																				T	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T
Template Predicted Secondary structure																										.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.																				.	.	.	.	.	.	.	.	80	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		T	Q	Q	E	L	A	R	R	I	G	K	P	K	Q	E	I	T	R	L	F	N	L	H	H	A	T	.	K	I	D	A	V	Q	L	A	A	K	A
Query Conservation																												.
Alig confidence																												.
Template Conservation
Template Sequence		T	Q	K	E	A	S	E	I	F	G	G	G	V	N	A	F	S	R	Y	E	K	G	N	A	P	H	P	S	T	I	K	L	L	R	V	L	D	K
Template Known Secondary structure												S		T	T								T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions