Job Description P67697 Confidence 98.37% Date Thu Jan 5 12:10:47 GMT 2012 Rank 52 Aligned Residues 55 % Identity 16% Template c3fymA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: the 1a structure of ymfm, a putative dna-binding membrane2 protein from staphylococcus aureus Resolution 1.00 Å

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		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.							.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure																																							.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.
Query Sequence		S	K	V	L	L	L	N	A	F	L	Q	S	E	I	T	Q	Q	E	L	A	R	R	I	G	K	P	K	Q	E	I	T	R	L	F	N	L	H	.	.	.	.	.	.	H	A	T	K	I	D	A	V	Q	L	A	A	K	A	L	G	K	E
Query Conservation																																							.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.
Template Conservation
Template Sequence		V	G	E	A	L	K	G	R	R	E	R	L	G	M	T	L	T	E	L	E	Q	R	T	G	I	K	R	E	M	L	V	H	I	E	N	N	E	F	D	Q	L	P	N	K	N	Y	S	E	G	F	I	R	K	Y	A	S	V	V	N	I	E
Template Known Secondary structure													T	T																						T	T		G	G	G	S	S	S	G	G	G												T	T
Template Predicted Secondary structure
Template SS confidence
		1004	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions