 |
Job Description | P67697 | Confidence | 98.94% | Date | Thu Jan 5 12:10:47 GMT 2012 |
Rank | 21 | Aligned Residues | 58 |
% Identity | 17% | Template | c3clcC_ |
PDB info |
PDB header:transcription regulator/dna | Chain: C: PDB Molecule:regulatory protein; |
PDBTitle: crystal structure of the restriction-modification controller protein2 c.esp1396i tetramer in complex with its natural 35 base-pair operator
|
Resolution | 2.80 Å |
|
  |   |
76 | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | A | S | K | V | L | L | L | N | A | F | L | Q | S | E | I | T | Q | Q | E | L | A | R | R | I | G | K | P | K | Q | E | I | T | R | L | F | N | L | H | H | A | T | K | I | D | A | V | Q | L | A | A | K | A | L | G | K | E | L |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |   |
|   |   |   |
|
|
|
|   |
|
|
|   |   |
|
|
|
|   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |
|
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |
|
|   |   |
|   |   |   |   |
|
|
|   |   |
|
|   |   |   |
|
|
|   |
|   |
|
|   |   |
|   |
|   |   |   |   |
|   |   |   |
|   |   |
|
|   |   |
|   |
|   |   |
Template Sequence |   |
S | K | V | S | F | V | I | K | K | I | R | L | E | K | G | M | T | Q | E | D | L | A | Y | K | S | N | L | D | R | T | Y | I | S | G | I | E | R | N | S | R | N | L | T | I | K | S | L | E | L | I | M | K | G | L | E | V | S | D |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  | T | T | S |
|  |  |  |  |  |  |  |  | T | T |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|