Return to main results Retrieve Phyre Job Id

Job DescriptionP67697
Confidence48.95%DateThu Jan 5 12:10:47 GMT 2012
Rank486Aligned Residues39
% Identity15%Templatec1yseA_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:dna-binding protein satb1; PDBTitle: solution structure of the mar-binding domain of satb1
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   72.......80.........90......... 100.........110..
Predicted Secondary structure 



.



Query SS confidence 



























.












Query Sequence  VPLSVASKVLLLNAFLQSEITQQELARR. IGKPKQEITRLFN
Query Conservation   
        
   
   



 


  .



   
 
 
 
Alig confidence 








..
















.












Template Conservation 

 

   
..  

    


  

  

 










Template Sequence  VSSEIYQWV. . RDELKRAGISQAVFARVAFNRTQGLLSEILR
Template Known Secondary structure 

T..T



S
TT
Template Predicted Secondary structure 
..






Template SS confidence 









































   371........ 380.........390.........400.........410
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions