Return to main results Retrieve Phyre Job Id

Job DescriptionP67697
Confidence55.25%DateThu Jan 5 12:10:47 GMT 2012
Rank433Aligned Residues34
% Identity21%Templatec1iufA_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:centromere abp1 protein; PDBTitle: low resolution solution structure of the two dna-binding2 domains in schizosaccharomyces pombe abp1 protein
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7980.........90 .........100 .........110..
Predicted Secondary structure 

..

......



Query SS confidence 











. .









. . . . . .











Query Sequence  KVLLLNAFLQSE. . ITQQELARRI. . . . . . GKPKQEITRLFN
Query Conservation     
   
   
..


 


  
......


   
 
 
 
Alig confidence 











..









......











Template Conservation 
  
            
  

  
   
   
  



 


Template Sequence  KRALRHYFFQLQNRSGQQDLIEWFREKFGKDISQPSVSQILS
Template Known Secondary structure  SSSS


SS

SSSSTT
Template Predicted Secondary structure 










Template SS confidence 









































   14.....20.........30.........40.........50.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions