Job Description P67697 Confidence 76.94% Date Thu Jan 5 12:10:47 GMT 2012 Rank 208 Aligned Residues 54 % Identity 17% Template c1hlvA_ PDB info PDB header:dna binding protein/dna Chain: A: PDB Molecule:major centromere autoantigen b; PDBTitle: crystal structure of cenp-b(1-129) complexed with the cenp-2 b box dna Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.																					.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure																				.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	L	S	V	A	S	K	V	L	L	L	N	A	F	L	Q	S	E	.	I	T	Q	Q	E	L	A	R	R	I	G	K	P	K	Q	E	I	T	R	L	F	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	H	H	A	T	K	I	D	A	V	Q	L	A	A
Query Conservation																				.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	L	T	F	R	E	K	S	R	I	I	Q	E	V	E	E	N	P	D	L	R	K	G	E	I	A	R	R	F	N	I	P	P	S	T	L	S	T	I	L	K	N	K	R	A	I	L	A	S	E	R	K	Y	G	V	A	S	T	C	R	K	T	N	K	L	S	P	Y	D	K	L	E	G	L	L
Template Known Secondary structure																			T	T	S										T												T												G	G	G	G	G	T								T	T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions