Job Description P77366 Confidence 99.84% Date Thu Jan 5 12:28:14 GMT 2012 Rank 46 Aligned Residues 215 % Identity 13% Template d2c4na1 SCOP info HAD-like HAD-like NagD-like Resolution 1.8

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.			.	30	.	.	.	.	.	.										.	.	.	40	.	.	.	.	.												.	.	.	.	50	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.									.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.									.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	L	Q	G	V	I	F	D	L	D	G	V	I	T	D	T	A	H	L	H	F	Q	A	W	Q	Q	I	.	.	A	A	E	I	G	I	S	I	.	.	.	.	.	.	.	.	.	D	A	Q	F	N	E	S	L	K	.	.	.	.	.	.	.	.	.	.	.	G	I	S	R	D	E	S	L	R	R	I	L	Q
Query Conservation																														.	.									.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.									.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	T	I	K	N	V	I	C	D	I	D	G	V	L	M	H	D	N	V	A	V	P	G	A	A	E	F	L	H	G	I	M	D	K	G	L	P	L	V	L	L	T	N	Y	P	S	Q	T	G	Q	D	L	A	N	R	F	A	T	A	G	V	D	V	P	D	S	V	F	Y	T	S	A	M	A	T	A	D	F	L	R
Template Known Secondary structure												B	T	T	T			T	T				T	T											T	T								S			S													T	T					G	G	G
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80								.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																								.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.
Query Sequence		H	G	G	K	E	G	D	F	N	S	Q	E	R	A	Q	L	A	Y	R	K	N	L	.	.	.	.	.	.	.	L	Y	V	H	S	L	R	E	L	T	V	N	A	V	L	P	G	I	R	S	L	L	A	D	L	R	A	Q	Q	I	S	V	G	L	A	S	V	S	L	N	A	P	T	I	L	A	A	L	E	L	R
Query Conservation																								.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	Q	E	G	K	K	A	Y	V	V	G	E	G	A	L	I	H	E	L	Y	K	A	G	F	T	I	T	D	V	N	P	D	F	V	I	V	G	E	T	R	S	Y	N	W	D	M	M	H	K	A	A	Y	F	V	A	N	G	A	R	F	I	A	T	N	P	D	T	H	G	R	G	F	Y	P	A	C	G	A	L	C
Template Known Secondary structure		T	S	S										T									T	T					S	S	S		S								T	T															T	T						S				S	B	S	S	T	T		B
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.			.	.	.	.
Predicted Secondary structure																																													.																															.	.
Query SS confidence																																													.																															.	.
Query Sequence		E	F	F	T	F	C	A	D	A	S	Q	L	K	N	S	K	P	D	P	E	I	F	L	A	A	C	A	G	L	G	V	P	P	Q	A	C	I	G	I	E	D	A	Q	.	A	G	I	D	A	I	N	A	S	G	M	R	S	V	G	I	G	A	G	L	T	G	A	Q	L	L	L	P	S	T	.	.	E	S	L	T
Query Conservation																																													.																															.	.
Alig confidence																																													.																															.	.
Template Conservation
Template Sequence		A	G	I	E	K	I	S	G	R	K	P	F	Y	V	G	K	P	S	P	W	I	I	R	A	A	L	N	K	M	Q	A	H	S	E	E	T	V	I	V	G	D	N	L	R	T	D	I	L	A	G	F	Q	A	G	L	E	T	I	L	V	L	S	G	V	S	S	L	D	D	I	D	S	M	P	F	R	P	S	W	I
Template Known Secondary structure																S	T	T	S	T											T			G	G	G						S		T	T	T								T	T							S	S	S	S			G	G	G	G	S	S		S	S			S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		209	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	P	R	L	S	A	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	P	S	V	A	E	I
Template Known Secondary structure			S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions