Return to main results Retrieve Phyre Job Id

Job DescriptionP77366
Confidence98.22%DateThu Jan 5 12:28:14 GMT 2012
Rank114Aligned Residues216
% Identity13%Templated1rlma_
SCOP infoHAD-like HAD-like Predicted hydrolases Cof
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10......... 20.........30...... ...40.........50. ........60......
Predicted Secondary structure 










....




......



......






Query SS confidence 
















. . . .
















. . . . . .














. . . . . .














Query Sequence  LQGVIFDLDGVITDTAH. . . . LHFQAWQQIAAEIGISI. . . . . . DAQFNESLKGISRDE. . . . . . SLRRILQHGGKEGDF
Query Conservation 

 



 



 
   ....    
        
   ......               ......               
Alig confidence 
















....
















......














......














Template Conservation 



  






              
  
   

   
 


           
      
  


 
          
Template Sequence  VKVIVTDMDGTFLNDAKTYNQPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGKQLFHG
Template Known Secondary structure 







S
TTS


T

SS
GGG
TTTTTTSGGGTTT
Template Predicted Secondary structure 




































Template SS confidence 















































































   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   67..70.........80. ........90.........100.........110.........120....
Predicted Secondary structure 
......................
















Query SS confidence 














. . . . . . . . . . . . . . . . . . . . . .










































Query Sequence  NSQERAQLAYRKNLL. . . . . . . . . . . . . . . . . . . . . . YVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVSLNAPTI
Query Conservation                 ......................                    
                      
Alig confidence 














......................










































Template Conservation            
                                                       
             
Template Sequence  ELTRHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNLPDEQIPLVI
Template Known Secondary structure 


T
TT
SS
TTS
TT
SSS
GGG

S


GGG
Template Predicted Secondary structure 



























Template SS confidence 















































































   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   125....130......... 140.........150.........160.........170.........180.........190.........
Predicted Secondary structure 






.....
























Query SS confidence 














. . . . .



























































Query Sequence  LAALELREFFTFCAD. . . . . ASQLKNSKPDPEIFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGAGLTGAQL
Query Conservation                 .....       
                
   
 


   

 

  

   
 
  
      
Alig confidence 














.....













































.












Template Conservation                               
      
          
 
 

  

  

  
  . 


 

    
 
Template Sequence  DKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARY. SFAMGNAAENIKQ
Template Known Secondary structure  TTTSS
STT
TT
ST

GGG
SGGG
S.
TT

Template Predicted Secondary structure 


























.




Template SS confidence 















































































   163......170.........180.........190.........200.........210.........220........ .230.........240.
 
   200....... ..210.........
Predicted Secondary structure 





.....





Query SS confidence 







. . . . .











Query Sequence  LLPSTESL. . . . . TWPRLSAFWQNV
Query Conservation          .....    
  
 
 
Alig confidence 







.....











Template Conservation   
  
       

   
   
   
Template Sequence  IARYATDDNNHEGALNVIQAVLDNT
Template Known Secondary structure 
S


GGGTT
Template Predicted Secondary structure 









Template SS confidence 
























   242.......250.........260......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions