Job Description P77366 Confidence 98.49% Date Thu Jan 5 12:28:14 GMT 2012 Rank 104 Aligned Residues 213 % Identity 15% Template c3niwA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:haloacid dehalogenase-like hydrolase; PDBTitle: crystal structure of a haloacid dehalogenase-like hydrolase from2 bacteroides thetaiotaomicron Resolution 1.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.				.	.	.							.	.	.	.	40	.	.	.	.														.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.				.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.				.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	L	Q	G	V	I	F	D	L	D	G	V	I	T	D	T	A	H	L	H	F	Q	A	W	Q	Q	I	A	A	E	I	.	.	.	G	I	S	.	.	.	.	.	.	I	D	A	Q	F	N	E	S	L	.	.	.	.	.	.	.	.	.	.	.	.	.	K	G	I	S	R	D	E	S	L	R	R	I	L	Q	H
Query Conservation																																	.	.	.				.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.				.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	Y	K	L	I	V	L	D	L	D	G	T	L	T	N	S	K	K	E	I	S	S	R	N	R	E	T	L	I	R	I	Q	E	Q	G	I	R	L	V	L	A	S	G	R	P	T	Y	G	I	V	P	L	A	N	E	L	R	X	N	E	F	G	G	F	I	L	S	Y	N	G	G	E	I	I	N	W	E	S	K	E
Template Known Secondary structure															S		T	T	S																T	T								S	S												T	T	G	G	G	T	T						G	G	G	T					T	T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.																				.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	G	K	E	G	D	F	N	S	Q	E	R	A	Q	L	A	Y	R	K	N	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	V	H	S	L	R	E	L	T	V	N	A	V	L	P	G	I	R	S	L	L	A	D	L	R	A	Q	Q	I	S	V	G	L	A	S	V	S	L	N
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		X	X	Y	E	N	V	L	P	N	E	V	V	P	V	L	Y	E	C	A	R	T	N	H	L	S	I	L	T	Y	D	G	A	E	I	V	T	E	N	S	L	D	P	Y	V	Q	K	E	A	F	L	N	K	X	A	I	R	E	T	N	D	F	L	T	D	I	T	L	P	V	A	K	C	L	I	V	G	D	A	G	K
Template Known Secondary structure										T	T												T	T								T	T					S		T	T												T							S						S		S			S						S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140							.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.
Query Sequence		A	P	T	I	L	A	A	L	E	L	R	E	F	F	T	F	C	A	D	A	.	.	.	.	.	.	S	Q	L	K	N	S	K	P	D	P	E	I	F	L	A	A	C	A	G	L	G	V	P	P	Q	A	C	I	G	I	E	D	A	Q	A	G	I	D	A	I	N	A	S	G	M	R	S	V	G	I	G	A	G	L
Query Conservation																						.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.																																														.
Template Conservation																																																																									.
Template Sequence		L	I	P	V	E	S	E	L	C	I	R	L	Q	G	K	I	N	V	F	R	S	E	P	Y	F	L	E	L	V	P	Q	G	I	D	K	A	L	S	L	S	V	L	L	E	N	I	G	X	T	R	E	E	V	I	A	I	G	D	G	Y	N	D	L	S	X	I	K	F	A	G	X	.	G	V	A	X	G	N	A	Q
Template Known Secondary structure													T	T	T	T								T	T							T	T															T			G	G	G							S	G	G	G							S	S		.					T	T	S
Template Predicted Secondary structure																																																																									.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.		.	.	.	.	.	.	.	240
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.						.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.
Query SS confidence																			.	.	.	.	.
Query Sequence		T	G	A	Q	L	L	L	P	S	T	E	S	L	T	W	P	R	.	.	.	.	.	L	S	A	F	W	Q	N	V
Query Conservation																			.	.	.	.	.
Alig confidence		.	.	.	.														.	.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	E	P	V	K	K	A	A	D	Y	I	T	L	T	N	D	E	D	G	V	A	E	A	I	E	R	I
Template Known Secondary structure		.	.	.	.								S						G	G	G	T
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions